Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00194 and RBAM_001200

See DNA alignment / Visit BSNT_00194 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:58
# Commandline: needle
#    -asequence pep-align/BSNT_00194___yazC.1.9828.seq
#    -bsequence pep-align/RBAM_001200___yazC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00194___yazC-RBAM_001200___yazC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00194___yazC-RBAM_001200___yazC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00194___yazC
# 2: RBAM_001200___yazC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:     127/143 (88.8%)
# Similarity:   140/143 (97.9%)
# Gaps:           0/143 ( 0.0%)
# Score: 654.0
# 
#
#=======================================

BSNT_00194___      1 MLEFDTIKDSKQLNGLALAYIGDAIFEVYVRHHLLKQGFTKPNDLHKKSS     50
                     ||:|:.||||||||||||||:||||||:||||||||||||||||||||:|
RBAM_001200__      1 MLQFEQIKDSKQLNGLALAYMGDAIFEIYVRHHLLKQGFTKPNDLHKKAS     50

BSNT_00194___     51 RIVSAKSQAEILFFLQNQSFFTEEEEAVLKRGRNAKSGTTPKNTDVQTYR    100
                     |||||||||:|||.||::|||||||||||:||||||||||||||||||||
RBAM_001200__     51 RIVSAKSQADILFRLQDESFFTEEEEAVLRRGRNAKSGTTPKNTDVQTYR    100

BSNT_00194___    101 YSTAFEALLGYLFLEKKEERLSQLVAEAIQFGTSGRKTNESAT    143
                     :|||||||||||||||:||||:||:|||||.||||||||||||
RBAM_001200__    101 HSTAFEALLGYLFLEKREERLNQLIAEAIQVGTSGRKTNESAT    143


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.