Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00194 and RBAM_001200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence dna-align/BSNT_00194___yazC.1.9828.seq
# -bsequence dna-align/RBAM_001200___yazC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00194___yazC-RBAM_001200___yazC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00194___yazC-RBAM_001200___yazC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00194___yazC
# 2: RBAM_001200___yazC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 436
# Identity: 367/436 (84.2%)
# Similarity: 367/436 (84.2%)
# Gaps: 8/436 ( 1.8%)
# Score: 1549.0
#
#
#=======================================
BSNT_00194___ 1 ATGCTTGAATTTGATAC-GATAAAAGATTCTAAGCAGCTTAACGGTCTTG 49
||||||.||||||| || .|||||||||||.||||||.|.||||||||||
RBAM_001200__ 1 ATGCTTCAATTTGA-ACAAATAAAAGATTCAAAGCAGTTAAACGGTCTTG 49
BSNT_00194___ 50 CGCTTGCTTATATAGGTGATGCCATTTTTGAAGTGTATGTCAGGCATCAC 99
||||.||||||||.||||||||||||||||||.|.||.|||.||||||||
RBAM_001200__ 50 CGCTCGCTTATATGGGTGATGCCATTTTTGAAATATACGTCCGGCATCAC 99
BSNT_00194___ 100 CTGCTTAAGCAGGGCTTTACCAAACCAAATGATCTTCATAAGAAATCAAG 149
||||||||||||||||||||.|||||.|||||.|||||||||||..|.||
RBAM_001200__ 100 CTGCTTAAGCAGGGCTTTACGAAACCGAATGACCTTCATAAGAAGGCGAG 149
BSNT_00194___ 150 CCGGATTGTTTCAGCAAAGTCACAGGCTGAGATCCTATTTTT---TCTGC 196
|||||||||.||.|||||.||||||||.|| |.||||.|| .||.|
RBAM_001200__ 150 CCGGATTGTATCGGCAAAATCACAGGCAGA---CATATTGTTCCGCCTTC 196
BSNT_00194___ 197 AGAATCAATCATTTTTTACGGAAGAAGAGGAAGCGGTGCTGAAAAGAGGC 246
||.|..||||.|||||.|||||.|||||||||||.|||||||.|||||||
RBAM_001200__ 197 AGGACGAATCCTTTTTCACGGAGGAAGAGGAAGCCGTGCTGAGAAGAGGC 246
BSNT_00194___ 247 AGAAATGCCAAGTCAGGGACAACACCTAAAAATACAGATGTTCAGACGTA 296
|||||.||.||.||||||||.||.||||||||.||||||||.||||||||
RBAM_001200__ 247 AGAAACGCGAAATCAGGGACGACGCCTAAAAACACAGATGTACAGACGTA 296
BSNT_00194___ 297 CCGCTACAGTACAGCATTTGAAGCGCTTCTGGGCTACCTTTTTCTAGAGA 346
||||.|.||||||||.|||||.||..|.||.||.|||||||||||.||||
RBAM_001200__ 297 CCGCCATAGTACAGCTTTTGAGGCTTTACTCGGATACCTTTTTCTTGAGA 346
BSNT_00194___ 347 AAAAAGAGGAACGACTTAGTCAGCTCGTAGCCGAAGCTATACAATTCGGG 396
|||.|||.|||.||||.|.||||||..|.||.||.|||||||||.|||||
RBAM_001200__ 347 AAAGAGAAGAAAGACTGAATCAGCTGATTGCTGAGGCTATACAAGTCGGG 396
BSNT_00194___ 397 ACGTCAGGGAGGAAAACAAATGAGTCAGCAACATGA 432
||||||||||||||||||||||||||||||||||||
RBAM_001200__ 397 ACGTCAGGGAGGAAAACAAATGAGTCAGCAACATGA 432
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