Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00186 and RBAM_001160

See DNA alignment / Visit BSNT_00186 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence pep-align/BSNT_00186___ispF.1.9828.seq
#    -bsequence pep-align/RBAM_001160___ispF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00186___ispF-RBAM_001160___ispF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00186___ispF-RBAM_001160___ispF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00186___ispF
# 2: RBAM_001160___ispF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     149/158 (94.3%)
# Similarity:   152/158 (96.2%)
# Gaps:           0/158 ( 0.0%)
# Score: 776.0
# 
#
#=======================================

BSNT_00186___      1 MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACL     50
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
RBAM_001160__      1 MFRIGQGFDVHQLTEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACL     50

BSNT_00186___     51 GAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTII    100
                     ||.|||||||||||||||||||||||||||||.|||:|||||||||||||
RBAM_001160__     51 GAAGEGDIGKHFPDTDPEFKDADSFKLLQHVWNIVKEKGYVLGNIDCTII    100

BSNT_00186___    101 AQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQ    150
                     ||||||.|:|:.||||||||||||||||||||||||||||||||||||||
RBAM_001160__    101 AQKPKMAPHIDAMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQ    150

BSNT_00186___    151 ATVLIQKG    158
                     |||||||.
RBAM_001160__    151 ATVLIQKA    158


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