Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00186 and RBAM_001160

See Amino acid alignment / Visit BSNT_00186 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence dna-align/BSNT_00186___ispF.1.9828.seq
#    -bsequence dna-align/RBAM_001160___ispF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00186___ispF-RBAM_001160___ispF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00186___ispF-RBAM_001160___ispF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00186___ispF
# 2: RBAM_001160___ispF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 477
# Identity:     390/477 (81.8%)
# Similarity:   390/477 (81.8%)
# Gaps:           0/477 ( 0.0%)
# Score: 1602.0
# 
#
#=======================================

BSNT_00186___      1 ATGTTTAGAATTGGACAAGGATTTGATGTGCATCAATTAGTGGAGGGCCG     50
                     |||||||||||.|||||||||||||||||||||||||||..|||.|||||
RBAM_001160__      1 ATGTTTAGAATCGGACAAGGATTTGATGTGCATCAATTAACGGAAGGCCG     50

BSNT_00186___     51 TCCTCTCATTATTGGCGGAATTGAAATCCCGTACGAAAAAGGGCTGCTTG    100
                     |||||||||.||.||||||||||||||.||.||.|||||.||||||||.|
RBAM_001160__     51 TCCTCTCATCATCGGCGGAATTGAAATTCCTTATGAAAAGGGGCTGCTCG    100

BSNT_00186___    101 GCCATTCTGATGCAGACGTATTGCTGCATACTGTCGCTGACGCCTGCCTG    150
                     |.|||||.|||||.||.||||||||||||||.|||||.|||||.||.||.
RBAM_001160__    101 GACATTCAGATGCTGATGTATTGCTGCATACAGTCGCAGACGCGTGTCTC    150

BSNT_00186___    151 GGAGCTGTGGGTGAAGGAGACATCGGCAAGCATTTTCCTGACACAGATCC    200
                     |||||.|..|||||||||||.||||||||||||||.||.||.||.|||||
RBAM_001160__    151 GGAGCGGCAGGTGAAGGAGATATCGGCAAGCATTTCCCGGATACTGATCC    200

BSNT_00186___    201 CGAGTTCAAGGACGCAGATTCTTTCAAATTACTTCAGCATGTCTGGGGAA    250
                     .||.||||||||.||.||||||||.||..|.|||||||||||||||...|
RBAM_001160__    201 GGAATTCAAGGATGCGGATTCTTTTAAGCTTCTTCAGCATGTCTGGAACA    250

BSNT_00186___    251 TCGTGAAACAGAAGGGGTATGTCCTTGGGAACATTGATTGCACCATCATA    300
                     |.||.|||.|.||.||.||.||.||.||.||.||.||.|||||.||.||.
RBAM_001160__    251 TTGTTAAAGAAAAAGGATACGTACTCGGAAATATAGACTGCACGATTATT    300

BSNT_00186___    301 GCGCAAAAGCCGAAGATGCTGCCGTACATAGAAGATATGAGAAAAAGAAT    350
                     ||||||||||||||.|||..||||.|.||.||.|.||||||||||.|.||
RBAM_001160__    301 GCGCAAAAGCCGAAAATGGCGCCGCATATTGATGCTATGAGAAAACGGAT    350

BSNT_00186___    351 TGCTGAAGGCCTTGAGGCAGATGTTTCTCAAGTAAATGTAAAAGCAACAA    400
                     .||.||||||||||||||.||.||.|||||||||||.||||||||.||.|
RBAM_001160__    351 AGCGGAAGGCCTTGAGGCGGACGTCTCTCAAGTAAACGTAAAAGCGACGA    400

BSNT_00186___    401 CGACAGAAAAGCTTGGATTTACAGGCCGGGCGGAAGGAATAGCGGCTCAG    450
                     |||||||||||||.||.|||||.||..|.||.||||||||.||.||||||
RBAM_001160__    401 CGACAGAAAAGCTCGGGTTTACCGGAAGAGCCGAAGGAATTGCCGCTCAG    450

BSNT_00186___    451 GCGACAGTGCTGATACAAAAAGGCTAA    477
                     |||||.||.|||||.|||||||.||.|
RBAM_001160__    451 GCGACCGTTCTGATCCAAAAAGCCTGA    477


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