Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00178 and RBAM_001110

See DNA alignment / Visit BSNT_00178 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:56
# Commandline: needle
#    -asequence pep-align/BSNT_00178___clpC.1.9828.seq
#    -bsequence pep-align/RBAM_001110___clpC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00178___clpC-RBAM_001110___clpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00178___clpC-RBAM_001110___clpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00178___clpC
# 2: RBAM_001110___clpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 810
# Identity:     797/810 (98.4%)
# Similarity:   808/810 (99.8%)
# Gaps:           0/810 ( 0.0%)
# Score: 3985.0
# 
#
#=======================================

BSNT_00178___      1 MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKAL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001110__      1 MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKAL     50

BSNT_00178___     51 QALGLGSDKIQKEVESLIGRGQEMSQTIHYTPRAKKVIELSMDEARKLGH    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001110__     51 QALGLGSDKIQKEVESLIGRGQEMSQTIHYTPRAKKVIELSMDEARKLGH    100

BSNT_00178___    101 SYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSS    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001110__    101 SYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSS    150

BSNT_00178___    151 AAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRT    200
                     |:||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001110__    151 ASGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRT    200

BSNT_00178___    201 KNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001110__    201 KNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAG    250

BSNT_00178___    251 TKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNIL    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001110__    251 TKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNIL    300

BSNT_00178___    301 KPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQI    350
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
RBAM_001110__    301 KPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSADESIQI    350

BSNT_00178___    351 LQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS    400
                     |:||||||||||||||||:|||||||||||||||||||||||||||||||
RBAM_001110__    351 LKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS    400

BSNT_00178___    401 KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLR    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001110__    401 KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLR    450

BSNT_00178___    451 EQVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWTGVPVSKIAQTETDKLL    500
                     ||||||||:||||||||||||:|:||||||||||||||||||||||||||
RBAM_001110__    451 EQVEDTKKTWKEKQGQENSEVSVEDIAMVVSSWTGVPVSKIAQTETDKLL    500

BSNT_00178___    501 NMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVG    550
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001110__    501 NMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVG    550

BSNT_00178___    551 KTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGG    600
                     |||||||||||||||||:|||:||||||||||||||||||||||||||||
RBAM_001110__    551 KTELARALAESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGG    600

BSNT_00178___    601 QLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFR    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001110__    601 QLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFR    650

BSNT_00178___    651 NTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPE    700
                     ||||||||||||||||||||||||||||:|||||||||||||||||||||
RBAM_001110__    651 NTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPE    700

BSNT_00178___    701 FINRIDEIIVFHSLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAK    750
                     ||||||||||||||||||||:|||||||||||||||||||||||||||||
RBAM_001110__    701 FINRIDEIIVFHSLEKKHLTDIVSLMSDQLTKRLKEQDLSIELTDAAKAK    750

BSNT_00178___    751 VAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE    800
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_001110__    751 VAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDGE    800

BSNT_00178___    801 FVVKTTAKTN    810
                     ||||||||||
RBAM_001110__    801 FVVKTTAKTN    810


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