Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00174 and RBAM_001080

See DNA alignment / Visit BSNT_00174 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:56
# Commandline: needle
#    -asequence pep-align/BSNT_00174___ctsR.1.9828.seq
#    -bsequence pep-align/RBAM_001080___ctsR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00174___ctsR-RBAM_001080___ctsR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00174___ctsR-RBAM_001080___ctsR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00174___ctsR
# 2: RBAM_001080___ctsR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:     150/154 (97.4%)
# Similarity:   153/154 (99.4%)
# Gaps:           0/154 ( 0.0%)
# Score: 737.0
# 
#
#=======================================

BSNT_00174___      1 MGHNISDIIEQYLKRVLDQNGKEILEIKRSEIADKFQCVPSQINYVINTR     50
                     ||||||||||||||:|||||||||||||||||||||||||||||||||||
RBAM_001080__      1 MGHNISDIIEQYLKQVLDQNGKEILEIKRSEIADKFQCVPSQINYVINTR     50

BSNT_00174___     51 FTSERGYIVESKRGGGGYIRIIKIKMNNEVVLINNIISQINTHLSQAASD    100
                     ||||||||||||||||||||||||||||||||||||||||:|||||||||
RBAM_001080__     51 FTSERGYIVESKRGGGGYIRIIKIKMNNEVVLINNIISQIHTHLSQAASD    100

BSNT_00174___    101 DIILRLLEDKVISEREAKMMVSVMDRSVLHIDLPERDELRARMMKAMLTS    150
                     |||||||||.|||||||||||||||||||:||||||||||||||||||||
RBAM_001080__    101 DIILRLLEDGVISEREAKMMVSVMDRSVLYIDLPERDELRARMMKAMLTS    150

BSNT_00174___    151 LKLK    154
                     ||||
RBAM_001080__    151 LKLK    154


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