Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00139 and RBAM_000910

See DNA alignment / Visit BSNT_00139 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:56
# Commandline: needle
#    -asequence pep-align/BSNT_00139___yacF.1.9828.seq
#    -bsequence pep-align/RBAM_000910___yacF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00139___yacF-RBAM_000910___yacF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00139___yacF-RBAM_000910___yacF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00139___yacF
# 2: RBAM_000910___yacF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     317/333 (95.2%)
# Similarity:   327/333 (98.2%)
# Gaps:           0/333 ( 0.0%)
# Score: 1648.0
# 
#
#=======================================

BSNT_00139___      1 MFKIGDIQLKNRVVLAPMAGVCNSAFRLTVKEFGAGLVCAEMVSDKAILY     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000910__      1 MFKIGDIQLKNRVVLAPMAGVCNSAFRLTVKEFGAGLVCAEMVSDKAILY     50

BSNT_00139___     51 NNARTMGMLYIDEREKPLSLQIFGGKKETLVEAAKFVDQNTTADIIDINM    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000910__     51 NNARTMGMLYIDEREKPLSLQIFGGKKETLVEAAKFVDQNTTADIIDINM    100

BSNT_00139___    101 GCPVPKITKCDAGAKWLLDPDKIYEMVSAVVDAVNKPVTVKMRMGWDEDH    150
                     ||||||||||||||||||||||||||||||||||:|||||||||||||:|
RBAM_000910__    101 GCPVPKITKCDAGAKWLLDPDKIYEMVSAVVDAVDKPVTVKMRMGWDEEH    150

BSNT_00139___    151 IFAVKNAQAVERAGGKAVALHGRTRVQMYEGTANWDIIKEVKQSVSIPVI    200
                     |:||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000910__    151 IYAVKNAQAVERAGGKAVALHGRTRVQMYEGTANWDIIKEVKQSVSIPVI    200

BSNT_00139___    201 GNGDVKTPQDAKRMLDETGVDGVMIGRAALGNPWMIYRTVQYLETGKLKE    250
                     |||||||||||||||:||||||||||||||||||||||||.|||||:||:
RBAM_000910__    201 GNGDVKTPQDAKRMLEETGVDGVMIGRAALGNPWMIYRTVHYLETGELKD    250

BSNT_00139___    251 EPQVREKMAVCKLHLDRLIDLKGENVAVREMRKHAAWYLKGVKGNANVRN    300
                     ||:|||||:||||||||||.||||||||||||||||||||||:|||||||
RBAM_000910__    251 EPKVREKMSVCKLHLDRLIKLKGENVAVREMRKHAAWYLKGVRGNANVRN    300

BSNT_00139___    301 EINHCETREEFVQLLDAFTVEVEAKELQNAKVG    333
                     |||.||||||.||||||||.|.||||||:||||
RBAM_000910__    301 EINQCETREEVVQLLDAFTAEAEAKELQDAKVG    333


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