Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00139 and RBAM_000910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence dna-align/BSNT_00139___yacF.1.9828.seq
# -bsequence dna-align/RBAM_000910___yacF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00139___yacF-RBAM_000910___yacF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00139___yacF-RBAM_000910___yacF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00139___yacF
# 2: RBAM_000910___yacF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1003
# Identity: 867/1003 (86.4%)
# Similarity: 867/1003 (86.4%)
# Gaps: 2/1003 ( 0.2%)
# Score: 3779.0
#
#
#=======================================
BSNT_00139___ 1 TTGTTCAAAATTGGAGATATTCAATTGAAAAACCGGGTTGTGCTCGCACC 50
.||||.|||||.||.|||||||||||||||||.|||||||||||.||.||
RBAM_000910__ 1 ATGTTTAAAATCGGTGATATTCAATTGAAAAATCGGGTTGTGCTTGCCCC 50
BSNT_00139___ 51 TATGGCTGGTGTCTGCAACTCTGCGTTCAGATTGACTGTAAAGGAATTCG 100
||||||.||||||||||||||.||||||||||||||||||||||||||||
RBAM_000910__ 51 TATGGCCGGTGTCTGCAACTCAGCGTTCAGATTGACTGTAAAGGAATTCG 100
BSNT_00139___ 101 GAGCCGGATTGGTATGCGCTGAAATGGTCAGTGACAAAGCGATCCTTTAC 150
|||||||||||||||||||||||||||||||.|||||||||||.||||||
RBAM_000910__ 101 GAGCCGGATTGGTATGCGCTGAAATGGTCAGCGACAAAGCGATTCTTTAC 150
BSNT_00139___ 151 AACAATGCAAGAACAATGGGTATGCTTTATATTGATGAACGTGAGAAACC 200
|||||.||.|||||||||||.||||||||.||||||||||||||.|||||
RBAM_000910__ 151 AACAACGCCAGAACAATGGGGATGCTTTACATTGATGAACGTGAAAAACC 200
BSNT_00139___ 201 ACTGAGCCTTCAAATTTTCGGAGGAAAAAAGGAAACCCTTGTGGAAGCGG 250
.||.||||||||.|||||.|||||.|||||||||||||||||||||||||
RBAM_000910__ 201 GCTCAGCCTTCAGATTTTTGGAGGGAAAAAGGAAACCCTTGTGGAAGCGG 250
BSNT_00139___ 251 CGAAGTTTGTAGACCAAAACACAACTGCTGATATCATTGATATTAACATG 300
|||||||||||||.||||||||.|||||||||||.|||||||||||||||
RBAM_000910__ 251 CGAAGTTTGTAGATCAAAACACGACTGCTGATATTATTGATATTAACATG 300
BSNT_00139___ 301 GGATGTCCCGTGCCGAAGATTACAAAATGCGATGCGGGAGCCAAATGGCT 350
|||||||||||.||.||||||||||||||.||||||||.|||||||||||
RBAM_000910__ 301 GGATGTCCCGTACCCAAGATTACAAAATGTGATGCGGGCGCCAAATGGCT 350
BSNT_00139___ 351 TCTCGATCCTGATAAGATTTACGAAATGGTTTCTGCAGTAGTGGATGCTG 400
|||||||||.|||||||||||.||||||||.||.||||||||.|||||||
RBAM_000910__ 351 TCTCGATCCCGATAAGATTTATGAAATGGTATCCGCAGTAGTAGATGCTG 400
BSNT_00139___ 401 TTAATAAGCCAGTTACAGTGAAAATGAGAATGGGCTGGGATGAAGACCAC 450
||.|||||||.|||||||||||.|||||||||||.|||||||||||.|||
RBAM_000910__ 401 TTGATAAGCCGGTTACAGTGAAGATGAGAATGGGTTGGGATGAAGAGCAC 450
BSNT_00139___ 451 ATTTTCGCAGTGAAAAATGCACAGGCTGTAGAACGTGCGGGCGGTAAAGC 500
||||..||.||||||||.||.||.||.||.||||||||.|||||.|||||
RBAM_000910__ 451 ATTTATGCGGTGAAAAACGCCCAAGCCGTTGAACGTGCCGGCGGAAAAGC 500
BSNT_00139___ 501 AGTGGCGCTTCACGGCCGTACGAGAGTGCAGATGTACGAAGGAACGGCAA 550
.||.||.||.||||||||.||.||||||||.|||||.|||||.||.||.|
RBAM_000910__ 501 CGTTGCCCTGCACGGCCGCACAAGAGTGCAAATGTATGAAGGCACTGCGA 550
BSNT_00139___ 551 ACTGGGATATCATCAAAGAAGTAAAACAATCAGTATCGATTCCGGTTATC 600
|||||||||||||.||||||||.||.|||||.||.||.|||||.||.|||
RBAM_000910__ 551 ACTGGGATATCATTAAAGAAGTGAAGCAATCCGTCTCCATTCCCGTCATC 600
BSNT_00139___ 601 GGAAACGGCGATGTTAAGACACCGCAGGATGCTAAGCGTATGCTCGATGA 650
||||||||.|||||.||.||.||.|||||.||.||.||.|||||.||.||
RBAM_000910__ 601 GGAAACGGTGATGTCAAAACGCCTCAGGACGCGAAACGCATGCTTGAGGA 650
BSNT_00139___ 651 GACAGGAGTAGACGGGGTCATGATCGGACGCGCTGCATTGGGTAACCCGT 700
.|||||.||.|||||.|||||||||||.||.||.|||.|.||.|||||||
RBAM_000910__ 651 AACAGGGGTTGACGGCGTCATGATCGGCCGGGCCGCACTCGGCAACCCGT 700
BSNT_00139___ 701 GGATGATTTACCGTACGGTTCAGTATCTTGAAACAGGTAAATTAAAAGAA 750
|||||||||||||||||||.||.||.||||||||.||..|.||||||||.
RBAM_000910__ 701 GGATGATTTACCGTACGGTGCACTACCTTGAAACCGGCGAGTTAAAAGAC 750
BSNT_00139___ 751 GAGCCGCAAGTACGCGAAAAAATGGCCGTATGCAAACTGCATCTT-GACC 799
||.|||.||||.||.|||||||||.|.|||||||||||||| ||| ||||
RBAM_000910__ 751 GAACCGAAAGTCCGTGAAAAAATGTCGGTATGCAAACTGCA-CTTAGACC 799
BSNT_00139___ 800 GCCTGATTGACTTAAAAGGTGAAAACGTAGCGGTAAGAGAAATGAGAAAG 849
||||||||.|.||||||||.|||||.||.||.||.|||||||||||||||
RBAM_000910__ 800 GCCTGATTAAGTTAAAAGGCGAAAATGTGGCAGTCAGAGAAATGAGAAAG 849
BSNT_00139___ 850 CACGCTGCATGGTATCTGAAAGGCGTGAAAGGCAATGCGAACGTTCGTAA 899
||||||||.|||||.||||||||.||.|.||||||||||||.||.||.||
RBAM_000910__ 850 CACGCTGCCTGGTACCTGAAAGGTGTCAGAGGCAATGCGAATGTACGCAA 899
BSNT_00139___ 900 TGAAATCAATCATTGCGAGACGAGAGAAGAGTTTGTACAGCTTTTAGATG 949
.|||||.||.||.||.||||||.|.|||||..||||.|||||||||||||
RBAM_000910__ 900 CGAAATTAACCAATGTGAGACGCGTGAAGAAGTTGTGCAGCTTTTAGATG 949
BSNT_00139___ 950 CATTTACGGTTGAAGTTGAGGCAAAAGAGCTTCAAAATGCAAAAGTAGGA 999
|||||||.|..||||..||||||||||||||||||.|||||||||||||.
RBAM_000910__ 950 CATTTACCGCCGAAGCAGAGGCAAAAGAGCTTCAAGATGCAAAAGTAGGT 999
BSNT_00139___ 1000 TAA 1002
|||
RBAM_000910__ 1000 TAA 1002
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