Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00135 and RBAM_000890

See DNA alignment / Visit BSNT_00135 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:56
# Commandline: needle
#    -asequence pep-align/BSNT_00135___folB.1.9828.seq
#    -bsequence pep-align/RBAM_000890___folA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00135___folB-RBAM_000890___folA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00135___folB-RBAM_000890___folA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00135___folB
# 2: RBAM_000890___folA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:     108/120 (90.0%)
# Similarity:   114/120 (95.0%)
# Gaps:           0/120 ( 0.0%)
# Score: 567.0
# 
#
#=======================================

BSNT_00135___      1 MDKVYVEGMEFYGYHGVFKEENKLGQRFKVDLTAELDLSKAGQTDDLEQT     50
                     ||||||||||||||||||:|||||||||||||||||||||||:||||..|
RBAM_000890__      1 MDKVYVEGMEFYGYHGVFEEENKLGQRFKVDLTAELDLSKAGKTDDLSYT     50

BSNT_00135___     51 INYAELYHVCKDIVEGEPVKLVETLAERIAGTVLEKFQPVQQCTVKVIKP    100
                     |||||||.||:.|||||||.||||||||||.||||||:|||||||||:||
RBAM_000890__     51 INYAELYSVCRGIVEGEPVNLVETLAERIADTVLEKFEPVQQCTVKVVKP    100

BSNT_00135___    101 DPPIPGHYKSVAIEITRKKS    120
                     ||||||||||||||:|||||
RBAM_000890__    101 DPPIPGHYKSVAIEMTRKKS    120


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