Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00135 and RBAM_000890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence dna-align/BSNT_00135___folB.1.9828.seq
# -bsequence dna-align/RBAM_000890___folA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00135___folB-RBAM_000890___folA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00135___folB-RBAM_000890___folA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00135___folB
# 2: RBAM_000890___folA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 364
# Identity: 292/364 (80.2%)
# Similarity: 292/364 (80.2%)
# Gaps: 2/364 ( 0.5%)
# Score: 1160.0
#
#
#=======================================
BSNT_00135___ 1 ATGGATAAAGTTTATGTAGAAGGTATGGAGTTTTACGGATATCACGGTGT 50
|||||||||||.||||||||||||||||||||||||||||||||||||||
RBAM_000890__ 1 ATGGATAAAGTATATGTAGAAGGTATGGAGTTTTACGGATATCACGGTGT 50
BSNT_00135___ 51 GTTCAAAGAAGAAAACAAACTTGGCCAGCGGTTTAAAGTCGATTTAACCG 100
||||.||||||||||||||||.||||||||.||.|||||.||..|.||.|
RBAM_000890__ 51 GTTCGAAGAAGAAAACAAACTCGGCCAGCGCTTCAAAGTAGACCTGACTG 100
BSNT_00135___ 101 CTGAGCTGGATTTAAGCAAAGCTGGACAAACAGACGACCTTGAGCAAACG 150
|.||.||||||||.||||||||.|||.||||.||.||||||....|.||.
RBAM_000890__ 101 CCGAACTGGATTTGAGCAAAGCGGGAAAAACGGATGACCTTTCTTATACC 150
BSNT_00135___ 151 ATCAACTATGCTGAGCTCTATCA-TGTATGTAAAGATATCGTGGAAGGGG 199
||.||||||||.||..|.|| || |||.||....|..|||||.||.||.|
RBAM_000890__ 151 ATTAACTATGCGGAATTGTA-CAGTGTCTGCCGCGGCATCGTTGAGGGCG 199
BSNT_00135___ 200 AGCCTGTAAAATTGGTAGAAACGCTGGCGGAACGTATTGCTGGCACTGTT 249
|.||.||.||.|||||.||.|||||.||||||||.||.||.|.|||.||.
RBAM_000890__ 200 AACCCGTCAATTTGGTCGAGACGCTTGCGGAACGGATCGCAGACACCGTC 249
BSNT_00135___ 250 CTCGAAAAATTTCAGCCTGTTCAGCAATGTACGGTGAAAGTGATTAAGCC 299
||.||.||||||.||||.||.||||||||||||||.||.||..|||||||
RBAM_000890__ 250 CTTGAGAAATTTGAGCCGGTGCAGCAATGTACGGTAAAGGTTGTTAAGCC 299
BSNT_00135___ 300 AGACCCGCCAATTCCCGGACACTATAAATCAGTAGCAATTGAAATTACGA 349
.||||||||.||||||||.||.|||||||||||.||.||.|||||.||||
RBAM_000890__ 300 TGACCCGCCGATTCCCGGCCATTATAAATCAGTGGCCATAGAAATGACGA 349
BSNT_00135___ 350 GAAAAAAGTCATGA 363
||||.||.||||||
RBAM_000890__ 350 GAAAGAAATCATGA 363
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