Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00130 and RBAM_000860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence pep-align/BSNT_00130___pabA.1.9828.seq
# -bsequence pep-align/RBAM_000860___pabA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00130___pabA-RBAM_000860___pabA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00130___pabA-RBAM_000860___pabA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00130___pabA
# 2: RBAM_000860___pabA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 195
# Identity: 171/195 (87.7%)
# Similarity: 187/195 (95.9%)
# Gaps: 1/195 ( 0.5%)
# Score: 917.0
#
#
#=======================================
BSNT_00130___ 1 MILMIDNYDSFTYNLVQYLGELGEELVVKRNDSITIEEIEELSPDFLMIS 50
||||||||||||||||||||||||||:|:|||.||||:||||:|||||||
RBAM_000860__ 1 MILMIDNYDSFTYNLVQYLGELGEELIVRRNDEITIEQIEELAPDFLMIS 50
BSNT_00130___ 51 PGPCSPDEAGISLEAIKHFAGEIPIFGVCLGHQSIAQVFGGDVVRAERLM 100
|||||||||||||||||||||.||||||||||||||||||||||||||||
RBAM_000860__ 51 PGPCSPDEAGISLEAIKHFAGSIPIFGVCLGHQSIAQVFGGDVVRAERLM 100
BSNT_00130___ 101 HGKTSDIEHDGKTIFEGLKNPLVATRYHSLIVKPETLPSCFTVTAQTKEG 150
|||||::.|||:|||:||:||||||||||||||.:|||.||||:||||||
RBAM_000860__ 101 HGKTSEVMHDGQTIFKGLQNPLVATRYHSLIVKADTLPDCFTVSAQTKEG 150
BSNT_00130___ 151 EIMAIRHNDLPIEGVQFHPESIMTSFGKEMLRNFIETYRKEVIA- 194
||||||||:||:|||||||||||||||||||||||||:||:.:.
RBAM_000860__ 151 EIMAIRHNELPVEGVQFHPESIMTSFGKEMLRNFIETHRKKEVTV 195
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