Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00130 and RBAM_000860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence dna-align/BSNT_00130___pabA.1.9828.seq
# -bsequence dna-align/RBAM_000860___pabA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00130___pabA-RBAM_000860___pabA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00130___pabA-RBAM_000860___pabA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00130___pabA
# 2: RBAM_000860___pabA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 593
# Identity: 463/593 (78.1%)
# Similarity: 463/593 (78.1%)
# Gaps: 13/593 ( 2.2%)
# Score: 1774.0
#
#
#=======================================
BSNT_00130___ 1 ATGATTTTAATGATTGATAACTACGATTCATTCACGTACAACTTGGTACA 50
|||||||||||||||||.||.||.||||||||.||||||||||||||.||
RBAM_000860__ 1 ATGATTTTAATGATTGACAATTATGATTCATTTACGTACAACTTGGTTCA 50
BSNT_00130___ 51 GTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGAC-AGC 99
.||||||||.|||||.|||||.||.|||.|.||.|.|||.|||||| ||
RBAM_000860__ 51 ATATTTGGGTGAGCTCGGGGAGGAACTGATCGTCAGACGGAATGACGAG- 99
BSNT_00130___ 100 ATCACAATCGAAGAAATTGAAGAACTGTCTCCGGACTTTC-TGATGATAT 148
||.|||||.||..|.||||||||.|||.|.||||| |||| |.|||||.|
RBAM_000860__ 100 ATTACAATTGAGCAGATTGAAGAGCTGGCACCGGA-TTTCTTAATGATTT 148
BSNT_00130___ 149 CTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATT 198
|.|||||.||||||||.||||||||.|||||.||||||||||||||.||.
RBAM_000860__ 149 CACCCGGGCCGTGCAGTCCTGATGAAGCGGGGATCAGCCTCGAAGCGATC 198
BSNT_00130___ 199 AAACATTTCGCAGGGGAAATTCCTATTTTCGGTGTATGTCTCGGACATCA 248
||||||||.||.||....||||||||||||||.|||||||||||.|||||
RBAM_000860__ 199 AAACATTTTGCCGGCAGTATTCCTATTTTCGGCGTATGTCTCGGGCATCA 248
BSNT_00130___ 249 GTCCATCGCACAAGTGTTCGGTGGTGACGTTGTTAGGGCAGAACGGCTTA 298
|||.||.||.|||||.|||||.||.||.||.||.||.||.||.|||||.|
RBAM_000860__ 249 GTCGATTGCGCAAGTATTCGGCGGCGATGTCGTCAGAGCGGAGCGGCTCA 298
BSNT_00130___ 299 TGCACGGGAAAACCTCGGA---TATCGAGCATGACGGCAAAACCATTTTT 345
|||||||.|||||.||.|| ||| |||||||||..|.||.||||||
RBAM_000860__ 299 TGCACGGCAAAACGTCAGAAGTTAT---GCATGACGGACAGACGATTTTT 345
BSNT_00130___ 346 GAAGGGTTGAAAAACCCCCTTGTTGCGACGCGATACCACTCGCTGATCGT 395
.||||..||.||||.||.|||||.||.||.||.|||||.||.||.||.||
RBAM_000860__ 346 AAAGGCCTGCAAAATCCGCTTGTCGCCACCCGGTACCATTCACTTATTGT 395
BSNT_00130___ 396 AAAACCTGAGACGCTGCCAAGCTGTTTTACAGTAACAGCACAAACGAAAG 445
.|||.|.||.||||||||....||||||||.|||.|.||.|||||.||||
RBAM_000860__ 396 CAAAGCGGACACGCTGCCGGATTGTTTTACGGTATCCGCTCAAACCAAAG 445
BSNT_00130___ 446 AAGGAGAAATCATGGCTATTCGCCACAATGACCTCCCGATAGAGGGCGTG 495
||||||||||.|||||.||.|||||.|||||.||.||..|.||.||.||.
RBAM_000860__ 446 AAGGAGAAATTATGGCAATCCGCCATAATGAGCTGCCTGTTGAAGGTGTT 495
BSNT_00130___ 496 CAATTTCACCCAGAGTCTATTATGACCTCCTTTGGGAAAGAAATGCTCAG 545
||.||.||.||.||.||.||.|||||||||||.||.|||||.||||||||
RBAM_000860__ 496 CAGTTCCATCCGGAATCCATCATGACCTCCTTCGGCAAAGAGATGCTCAG 545
BSNT_00130___ 546 AAATTTTATTGAGACATATCGC---AAGGAAGTTATTGCGTGA 585
|||.|||||.||||||.|.||| ||||||||.|..|.||||
RBAM_000860__ 546 AAACTTTATAGAGACACACCGCAAAAAGGAAGTGACGGTGTGA 588
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