Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00129 and RBAM_000850
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence pep-align/BSNT_00129___pabB.1.9828.seq
# -bsequence pep-align/RBAM_000850___pabB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00129___pabB-RBAM_000850___pabB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00129___pabB-RBAM_000850___pabB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00129___pabB
# 2: RBAM_000850___pabB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 499
# Identity: 390/499 (78.2%)
# Similarity: 424/499 (85.0%)
# Gaps: 29/499 ( 5.8%)
# Score: 2038.0
#
#
#=======================================
BSNT_00129___ 1 MEEKFTFFTHNIALQLKTSKKENRGMIQMAQRRPAGKKVPFQKDSFLQQF 50
.||||||||:|:||.|.:|||::
RBAM_000850__ 1 ---------------------------MMAQRRPAGRKIPFTKQAFLQRY 23
BSNT_00129___ 51 EKLAQSRKHHVLLESARGGRYSIAGLDPIATVKGKDGITTIKHGDEMLFK 100
|.|::|||.|||||||||||:|||||||||:|:||||||||||..|.|||
RBAM_000850__ 24 ENLSKSRKRHVLLESARGGRFSIAGLDPIASVRGKDGITTIKHEGETLFK 73
BSNT_00129___ 101 EGDPLRAFHSWFKTLETETNHEFPDFQGGAIGFLSYDYARYIENFKMLSL 150
|||||||||.||.||.||||.||||||||||||:||||||||||||||||
RBAM_000850__ 74 EGDPLRAFHEWFGTLGTETNVEFPDFQGGAIGFISYDYARYIENFKMLSL 123
BSNT_00129___ 151 DDLETPDIYFLVFDDIAVYDHQEESLWLITHVNGSDQETADVKLSELEQM 200
|||||||||||||||:|||||:||:||||||....:.:.|:.|||.||.|
RBAM_000850__ 124 DDLETPDIYFLVFDDVAVYDHEEEALWLITHTEAEEADLAEEKLSRLEGM 173
BSNT_00129___ 201 WLT-ELPAVSLREMNPETDGSFAAPFTEDGFSQAVEKIKQYIASGDVFQV 249
|.: :........:|...|||:||||||:|||||||:|||||||||||||
RBAM_000850__ 174 WCSLQTADEPFSPLNRNGDGSYAAPFTEEGFSQAVEQIKQYIASGDVFQV 223
BSNT_00129___ 250 NLSIRQSQSLSAHPYQIYKTLREVNPSPYMAYLETPDFQIICGSPELLVS 299
|||||||||||.|||::||.||.|||||||||||||.||:|||||||||:
RBAM_000850__ 224 NLSIRQSQSLSVHPYEVYKHLRNVNPSPYMAYLETPGFQVICGSPELLVT 273
BSNT_00129___ 300 KKGKLLETRPIAGTRSRGKTNEEDEVLANELIHNEKERAEHVMLVDLERN 349
||||.||||||||||||||.:.||:.||:|||||||||||||||||||||
RBAM_000850__ 274 KKGKKLETRPIAGTRSRGKDDAEDKALADELIHNEKERAEHVMLVDLERN 323
BSNT_00129___ 350 DLGRVSRYGSVRVNEFMAIEKYSHVMHIVSNVQGELQDGYDAVDIIHAVF 399
||||||||||||||||||||||||||||||||||||||||||.|||||||
RBAM_000850__ 324 DLGRVSRYGSVRVNEFMAIEKYSHVMHIVSNVQGELQDGYDATDIIHAVF 373
BSNT_00129___ 400 PGGTITGAPKVRTMEIIEELEPTRRGLYTGSIGWFGYNHDLQFNIVIRTI 449
||||||||||||||||||||||||||||||||||||:|.|||||||||||
RBAM_000850__ 374 PGGTITGAPKVRTMEIIEELEPTRRGLYTGSIGWFGFNGDLQFNIVIRTI 423
BSNT_00129___ 450 YATGGQAFMQSGAGVVIDSVPKHEYKESFKKAFAMQRALELSKEETKIR 498
||.||.|||||||||||||||||||||||||||||::|||||:||||.
RBAM_000850__ 424 YAAGGHAFMQSGAGVVIDSVPKHEYKESFKKAFAMKKALELSEEETKN- 471
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