Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00124 and RBAM_000820

See DNA alignment / Visit BSNT_00124 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:55
# Commandline: needle
#    -asequence pep-align/BSNT_00124___hslO.1.9828.seq
#    -bsequence pep-align/RBAM_000820___hslO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00124___hslO-RBAM_000820___hslO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00124___hslO-RBAM_000820___hslO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00124___hslO
# 2: RBAM_000820___hslO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     265/291 (91.1%)
# Similarity:   285/291 (97.9%)
# Gaps:           0/291 ( 0.0%)
# Score: 1387.0
# 
#
#=======================================

BSNT_00124___      1 MDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASL     50
                     ||||:||:|||||||||||||||||||.||||.||||||||:||||||||
RBAM_000820__      1 MDYLIKAIAYDGKVRAYAARTTDMVNEAQRRHDTWPTASAAIGRTMTASL     50

BSNT_00124___     51 MLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSNPQVHFDLNE    100
                     ||||||||:|||||||||||||||||||||||||||||||||.|||||||
RBAM_000820__     51 MLGAMLKGEDKLTVKIEGGGPIGAIVADANAKGEVRAYVSNPHVHFDLNE    100

BSNT_00124___    101 QGKLDVRRAVGTNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSS    150
                     ||||||||||||:||||||||||||::|||||||||||||||||||||||
RBAM_000820__    101 QGKLDVRRAVGTDGTLSVVKDLGLRDYFTGQVEIVSGELGDDFTYYLVSS    150

BSNT_00124___    151 EQVPSSVGVGVLVNPDNTILAAGGFIIQLMPGTDDETITKIEQRLSQVEP    200
                     |||||||||||||||||||||||||||||:||||:|||:.||::|||:||
RBAM_000820__    151 EQVPSSVGVGVLVNPDNTILAAGGFIIQLLPGTDEETISTIEKQLSQIEP    200

BSNT_00124___    201 ISKLIQKGLTPEEILEEVLGEKPEILETMPVRFHCPCSKERFETAILGLG    250
                     ||||||||||||||||||||:||::||||||:|||.|||:||||||||||
RBAM_000820__    201 ISKLIQKGLTPEEILEEVLGQKPDVLETMPVKFHCSCSKDRFETAILGLG    250

BSNT_00124___    251 KKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTTR    291
                     ||||||||||||:||||||||||||||||||||.|||:|||
RBAM_000820__    251 KKEIQDMIEEDGKAEAVCHFCNEKYLFTKEELEELRDETTR    291


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