Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00124 and RBAM_000820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence dna-align/BSNT_00124___hslO.1.9828.seq
# -bsequence dna-align/RBAM_000820___hslO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00124___hslO-RBAM_000820___hslO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00124___hslO-RBAM_000820___hslO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00124___hslO
# 2: RBAM_000820___hslO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 876
# Identity: 713/876 (81.4%)
# Similarity: 713/876 (81.4%)
# Gaps: 0/876 ( 0.0%)
# Score: 2913.0
#
#
#=======================================
BSNT_00124___ 1 ATGGATTATTTAGTAAAAGCACTTGCGTATGACGGAAAAGTTCGGGCTTA 50
||||||||||||.|.||||||.||||.||||||||.|||||.||||||||
RBAM_000820__ 1 ATGGATTATTTAATTAAAGCAATTGCATATGACGGTAAAGTGCGGGCTTA 50
BSNT_00124___ 51 TGCGGCGAGAACGACTGATATGGTAAATGAGGGGCAGAGACGCCATGGTA 100
|||.||.||||||||.||||||||||||||.|.|||.|||.|.||||..|
RBAM_000820__ 51 TGCAGCCAGAACGACAGATATGGTAAATGAAGCGCAAAGAAGGCATGACA 100
BSNT_00124___ 101 CGTGGCCGACAGCATCCGCTGCATTGGGCCGCACAATGACAGCTTCACTT 150
||||||||||.|||||.||.|||.|.|||||.||.|||||||||||.||.
RBAM_000820__ 101 CGTGGCCGACGGCATCAGCCGCAATCGGCCGGACGATGACAGCTTCTCTG 150
BSNT_00124___ 151 ATGCTCGGCGCTATGCTGAAGGGCGATGATAAGCTGACCGTGAAAATCGA 200
|||||.||.||.|||||.|||||.||.|||||||||||.||.|||||.||
RBAM_000820__ 151 ATGCTAGGAGCGATGCTTAAGGGTGAAGATAAGCTGACAGTCAAAATAGA 200
BSNT_00124___ 201 GGGCGGAGGTCCGATCGGAGCTATTGTAGCTGATGCCAATGCCAAAGGAG 250
.|||||.||.|||||||||||.|||||.||.|||||.||.||.||.||.|
RBAM_000820__ 201 AGGCGGCGGCCCGATCGGAGCCATTGTCGCAGATGCGAACGCAAAGGGTG 250
BSNT_00124___ 251 AAGTCAGAGCCTATGTCTCTAACCCGCAAGTTCATTTTGATTTAAATGAA 300
|.||.|||||.||.||.||.||||||||.||||||||||||.|.||||||
RBAM_000820__ 251 AGGTAAGAGCATACGTATCAAACCCGCACGTTCATTTTGATCTCAATGAA 300
BSNT_00124___ 301 CAAGGCAAGCTTGATGTCAGACGTGCGGTTGGAACAAACGGAACGTTAAG 350
|||||.||.||.|||||||||||.|||||.|||||..|.|||||..|.||
RBAM_000820__ 301 CAAGGGAAACTGGATGTCAGACGGGCGGTCGGAACTGATGGAACACTCAG 350
BSNT_00124___ 351 TGTCGTAAAAGATTTAGGTTTGCGCGAGTTCTTCACAGGACAAGTAGAAA 400
|||||||||||||||.||.|||||.||.|..||.||.|||||||||||.|
RBAM_000820__ 351 TGTCGTAAAAGATTTGGGCTTGCGTGATTATTTTACGGGACAAGTAGAGA 400
BSNT_00124___ 401 TCGTTTCAGGAGAATTAGGCGATGATTTCACTTACTATCTTGTATCATCT 450
|.||.||.||.|||.|.||.||.||.|||||.||.||||||||.||.|||
RBAM_000820__ 401 TTGTCTCGGGTGAACTCGGTGACGACTTCACATATTATCTTGTTTCTTCT 450
BSNT_00124___ 451 GAGCAGGTTCCTTCATCAGTGGGCGTAGGTGTGCTCGTAAATCCTGACAA 500
||.||.||.||||||||.||.|||||||||||.||.|||||||||||.||
RBAM_000820__ 451 GAACAAGTCCCTTCATCTGTCGGCGTAGGTGTTCTGGTAAATCCTGATAA 500
BSNT_00124___ 501 TACCATTCTTGCGGCAGGGGGCTTTATTATTCAGCTGATGCCGGGAACAG 550
.||.|||||.||.||.||.||.||.||.||||||||..|.|||||.||.|
RBAM_000820__ 501 CACGATTCTCGCTGCGGGCGGGTTCATCATTCAGCTTCTTCCGGGGACTG 550
BSNT_00124___ 551 ATGATGAAACAATCACAAAAATTGAACAGCGTCTATCTCAAGTAGAGCCG 600
||||.|||||.||..|||.|||||||.|||...||||||||.|.||.|||
RBAM_000820__ 551 ATGAAGAAACCATTTCAACAATTGAAAAGCAATTATCTCAAATCGAACCG 600
BSNT_00124___ 601 ATTTCTAAGCTCATCCAAAAAGGGCTGACACCAGAAGAAATTTTAGAAGA 650
|||||.||..|.||.||||||||.||||||||.||||||||.||.|||||
RBAM_000820__ 601 ATTTCAAAATTGATTCAAAAAGGCCTGACACCGGAAGAAATCTTGGAAGA 650
BSNT_00124___ 651 AGTCCTAGGCGAGAAACCTGAGATTTTGGAAACGATGCCTGTCAGATTCC 700
|||.||.||..|.|||||.||..||.|.|||||.|||||.||||.|||.|
RBAM_000820__ 651 AGTTCTGGGTCAAAAACCGGACGTTCTCGAAACAATGCCGGTCAAATTTC 700
BSNT_00124___ 701 ATTGCCCTTGTTCAAAAGAACGGTTCGAAACAGCCATTTTGGGACTAGGC 750
|.||..|||||||||||||.||.||||||||.||||||||.|||||||||
RBAM_000820__ 701 ACTGTTCTTGTTCAAAAGATCGATTCGAAACGGCCATTTTAGGACTAGGC 750
BSNT_00124___ 751 AAAAAAGAAATTCAAGATATGATAGAAGAAGATGGACAAGCCGAAGCAGT 800
|||||||||||.||||||||||||||||||||.|||.||||||||||.||
RBAM_000820__ 751 AAAAAAGAAATACAAGATATGATAGAAGAAGACGGAAAAGCCGAAGCGGT 800
BSNT_00124___ 801 ATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAG 850
.|||||||||||||||||.|||||.|||||||||||||||||.|||||||
RBAM_000820__ 801 TTGCCATTTTTGTAATGAGAAGTATTTATTTACAAAAGAAGAACTGGAAG 850
BSNT_00124___ 851 GGCTTCGTGACCAAACTACCCGCTAA 876
.||||||||||.||||.||||||||.
RBAM_000820__ 851 AGCTTCGTGACGAAACAACCCGCTAG 876
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