Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00124 and RBAM_000820

See Amino acid alignment / Visit BSNT_00124 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:55
# Commandline: needle
#    -asequence dna-align/BSNT_00124___hslO.1.9828.seq
#    -bsequence dna-align/RBAM_000820___hslO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00124___hslO-RBAM_000820___hslO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00124___hslO-RBAM_000820___hslO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00124___hslO
# 2: RBAM_000820___hslO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 876
# Identity:     713/876 (81.4%)
# Similarity:   713/876 (81.4%)
# Gaps:           0/876 ( 0.0%)
# Score: 2913.0
# 
#
#=======================================

BSNT_00124___      1 ATGGATTATTTAGTAAAAGCACTTGCGTATGACGGAAAAGTTCGGGCTTA     50
                     ||||||||||||.|.||||||.||||.||||||||.|||||.||||||||
RBAM_000820__      1 ATGGATTATTTAATTAAAGCAATTGCATATGACGGTAAAGTGCGGGCTTA     50

BSNT_00124___     51 TGCGGCGAGAACGACTGATATGGTAAATGAGGGGCAGAGACGCCATGGTA    100
                     |||.||.||||||||.||||||||||||||.|.|||.|||.|.||||..|
RBAM_000820__     51 TGCAGCCAGAACGACAGATATGGTAAATGAAGCGCAAAGAAGGCATGACA    100

BSNT_00124___    101 CGTGGCCGACAGCATCCGCTGCATTGGGCCGCACAATGACAGCTTCACTT    150
                     ||||||||||.|||||.||.|||.|.|||||.||.|||||||||||.||.
RBAM_000820__    101 CGTGGCCGACGGCATCAGCCGCAATCGGCCGGACGATGACAGCTTCTCTG    150

BSNT_00124___    151 ATGCTCGGCGCTATGCTGAAGGGCGATGATAAGCTGACCGTGAAAATCGA    200
                     |||||.||.||.|||||.|||||.||.|||||||||||.||.|||||.||
RBAM_000820__    151 ATGCTAGGAGCGATGCTTAAGGGTGAAGATAAGCTGACAGTCAAAATAGA    200

BSNT_00124___    201 GGGCGGAGGTCCGATCGGAGCTATTGTAGCTGATGCCAATGCCAAAGGAG    250
                     .|||||.||.|||||||||||.|||||.||.|||||.||.||.||.||.|
RBAM_000820__    201 AGGCGGCGGCCCGATCGGAGCCATTGTCGCAGATGCGAACGCAAAGGGTG    250

BSNT_00124___    251 AAGTCAGAGCCTATGTCTCTAACCCGCAAGTTCATTTTGATTTAAATGAA    300
                     |.||.|||||.||.||.||.||||||||.||||||||||||.|.||||||
RBAM_000820__    251 AGGTAAGAGCATACGTATCAAACCCGCACGTTCATTTTGATCTCAATGAA    300

BSNT_00124___    301 CAAGGCAAGCTTGATGTCAGACGTGCGGTTGGAACAAACGGAACGTTAAG    350
                     |||||.||.||.|||||||||||.|||||.|||||..|.|||||..|.||
RBAM_000820__    301 CAAGGGAAACTGGATGTCAGACGGGCGGTCGGAACTGATGGAACACTCAG    350

BSNT_00124___    351 TGTCGTAAAAGATTTAGGTTTGCGCGAGTTCTTCACAGGACAAGTAGAAA    400
                     |||||||||||||||.||.|||||.||.|..||.||.|||||||||||.|
RBAM_000820__    351 TGTCGTAAAAGATTTGGGCTTGCGTGATTATTTTACGGGACAAGTAGAGA    400

BSNT_00124___    401 TCGTTTCAGGAGAATTAGGCGATGATTTCACTTACTATCTTGTATCATCT    450
                     |.||.||.||.|||.|.||.||.||.|||||.||.||||||||.||.|||
RBAM_000820__    401 TTGTCTCGGGTGAACTCGGTGACGACTTCACATATTATCTTGTTTCTTCT    450

BSNT_00124___    451 GAGCAGGTTCCTTCATCAGTGGGCGTAGGTGTGCTCGTAAATCCTGACAA    500
                     ||.||.||.||||||||.||.|||||||||||.||.|||||||||||.||
RBAM_000820__    451 GAACAAGTCCCTTCATCTGTCGGCGTAGGTGTTCTGGTAAATCCTGATAA    500

BSNT_00124___    501 TACCATTCTTGCGGCAGGGGGCTTTATTATTCAGCTGATGCCGGGAACAG    550
                     .||.|||||.||.||.||.||.||.||.||||||||..|.|||||.||.|
RBAM_000820__    501 CACGATTCTCGCTGCGGGCGGGTTCATCATTCAGCTTCTTCCGGGGACTG    550

BSNT_00124___    551 ATGATGAAACAATCACAAAAATTGAACAGCGTCTATCTCAAGTAGAGCCG    600
                     ||||.|||||.||..|||.|||||||.|||...||||||||.|.||.|||
RBAM_000820__    551 ATGAAGAAACCATTTCAACAATTGAAAAGCAATTATCTCAAATCGAACCG    600

BSNT_00124___    601 ATTTCTAAGCTCATCCAAAAAGGGCTGACACCAGAAGAAATTTTAGAAGA    650
                     |||||.||..|.||.||||||||.||||||||.||||||||.||.|||||
RBAM_000820__    601 ATTTCAAAATTGATTCAAAAAGGCCTGACACCGGAAGAAATCTTGGAAGA    650

BSNT_00124___    651 AGTCCTAGGCGAGAAACCTGAGATTTTGGAAACGATGCCTGTCAGATTCC    700
                     |||.||.||..|.|||||.||..||.|.|||||.|||||.||||.|||.|
RBAM_000820__    651 AGTTCTGGGTCAAAAACCGGACGTTCTCGAAACAATGCCGGTCAAATTTC    700

BSNT_00124___    701 ATTGCCCTTGTTCAAAAGAACGGTTCGAAACAGCCATTTTGGGACTAGGC    750
                     |.||..|||||||||||||.||.||||||||.||||||||.|||||||||
RBAM_000820__    701 ACTGTTCTTGTTCAAAAGATCGATTCGAAACGGCCATTTTAGGACTAGGC    750

BSNT_00124___    751 AAAAAAGAAATTCAAGATATGATAGAAGAAGATGGACAAGCCGAAGCAGT    800
                     |||||||||||.||||||||||||||||||||.|||.||||||||||.||
RBAM_000820__    751 AAAAAAGAAATACAAGATATGATAGAAGAAGACGGAAAAGCCGAAGCGGT    800

BSNT_00124___    801 ATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAG    850
                     .|||||||||||||||||.|||||.|||||||||||||||||.|||||||
RBAM_000820__    801 TTGCCATTTTTGTAATGAGAAGTATTTATTTACAAAAGAAGAACTGGAAG    850

BSNT_00124___    851 GGCTTCGTGACCAAACTACCCGCTAA    876
                     .||||||||||.||||.||||||||.
RBAM_000820__    851 AGCTTCGTGACGAAACAACCCGCTAG    876


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