Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00123 and RBAM_000810

See DNA alignment / Visit BSNT_00123 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:55
# Commandline: needle
#    -asequence pep-align/BSNT_00123___yacB.1.9828.seq
#    -bsequence pep-align/RBAM_000810___yacB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00123___yacB-RBAM_000810___yacB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00123___yacB-RBAM_000810___yacB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00123___yacB
# 2: RBAM_000810___yacB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     236/258 (91.5%)
# Similarity:   245/258 (95.0%)
# Gaps:           6/258 ( 2.3%)
# Score: 1240.0
# 
#
#=======================================

BSNT_00123___      1 ------MGNTNTVLGVYHDGKLEYHWRIETSRHKTEDEFGMILRSLFDHS     44
                           :||||||:||||||:||||||||||||||||||||:|||||:||
RBAM_000810__      1 MLLVIDVGNTNTVIGVYHDGELEYHWRIETSRHKTEDEFGMLLRSLFEHS     50

BSNT_00123___     45 GLMFEQIDGIIISSVVPPIMFALERMCTKYFHIEPQIVGPGMKTGLNIKY     94
                     |||||||:|||||||||||||:||||||||||||||:|||||||||||||
RBAM_000810__     51 GLMFEQIEGIIISSVVPPIMFSLERMCTKYFHIEPQVVGPGMKTGLNIKY    100

BSNT_00123___     95 DNPKEVGADRIVNAVAAIHLYGNPLIVVDFGTATTYCYIDENKQYMGGAI    144
                     ||||||||||||||||||..||.|||||||||||||||||||||||||||
RBAM_000810__    101 DNPKEVGADRIVNAVAAIQQYGAPLIVVDFGTATTYCYIDENKQYMGGAI    150

BSNT_00123___    145 APGITISTEALYSRAAKLPRIEITRPDNIIGKNTVSAMQSGILFGYVGQV    194
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
RBAM_000810__    151 APGITISTEALYSRAAKLPRIEIARPDNIIGKNTVSAMQSGILFGYVGQV    200

BSNT_00123___    195 EGIVKRMKWQAKQEPKVIATGGLAPLIANESDCIDIVDPFLTLKGLELIY    244
                     |||||||||||.||||||||||||.||||||||||||||||||||||:||
RBAM_000810__    201 EGIVKRMKWQATQEPKVIATGGLASLIANESDCIDIVDPFLTLKGLEIIY    250

BSNT_00123___    245 ERNRVGSV    252
                     ||||||.|
RBAM_000810__    251 ERNRVGHV    258


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