Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00123 and RBAM_000810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence dna-align/BSNT_00123___yacB.1.9828.seq
# -bsequence dna-align/RBAM_000810___yacB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00123___yacB-RBAM_000810___yacB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00123___yacB-RBAM_000810___yacB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00123___yacB
# 2: RBAM_000810___yacB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 781
# Identity: 622/781 (79.6%)
# Similarity: 622/781 (79.6%)
# Gaps: 26/781 ( 3.3%)
# Score: 2555.0
#
#
#=======================================
BSNT_00123___ 1 ------------------GTGGGGAACACCAATACTGTACTTGGTGTATA 32
||||||||||||||.||.||..||||||||||
RBAM_000810__ 1 TTGTTACTGGTTATAGATGTGGGGAACACCAACACCGTGATTGGTGTATA 50
BSNT_00123___ 33 TCATGATGGAAAATTAGAATATCACTGGCGTATAGAAACAAGCAGGCATA 82
|||||||||..|||||||||||||.|||||.||||||||.||||||||.|
RBAM_000810__ 51 TCATGATGGGGAATTAGAATATCATTGGCGCATAGAAACGAGCAGGCACA 100
BSNT_00123___ 83 AAACAGAAGATGAGTTTGGGATGATTTTGCGCTCCTTATTTGATCACTCC 132
||||||||||.||.||.||.|||.|..|.||.|||||||||||.||.|||
RBAM_000810__ 101 AAACAGAAGACGAATTCGGCATGCTGCTCCGTTCCTTATTTGAACATTCC 150
BSNT_00123___ 133 GGGCTTATGTTTGAACAGATAGATGGCATTATTATTTCGTCAGTAGTGCC 182
||.||.||||||||||||||.||.||.|||||.||.||.||.||.|||||
RBAM_000810__ 151 GGACTCATGTTTGAACAGATTGAAGGGATTATCATCTCATCCGTGGTGCC 200
BSNT_00123___ 183 GCCAATCATGTTTGCGTTAGAAAGAATGTGCACAAAATACTTTCATATCG 232
|||.||.|||||..|.|||||||||||||||||||||||||||||.||||
RBAM_000810__ 201 GCCGATTATGTTCTCTTTAGAAAGAATGTGCACAAAATACTTTCACATCG 250
BSNT_00123___ 233 AGCCTCAAATTGTTGGTCCAGGTATGAAAACCGGTTTAAATATAAAATAT 282
||||.|||.||||.||.||.||.||||||||.||||||||||||||.|||
RBAM_000810__ 251 AGCCGCAAGTTGTCGGCCCGGGAATGAAAACAGGTTTAAATATAAAGTAT 300
BSNT_00123___ 283 GACAATCCGAAAGAAGTGGGGGCAGACAGAATCGTAAATGCTGTCGCTGC 332
||||||||||||||||||||.||.|||||.|||||.|||||.||.||.||
RBAM_000810__ 301 GACAATCCGAAAGAAGTGGGAGCTGACAGGATCGTCAATGCCGTTGCGGC 350
BSNT_00123___ 333 GATACACTTGTACGGCAATCCATTAATTGTTGTCGATTTCGGAACCGCCA 382
|||.||...|||.|||...||.|||||||||||.|||||||||||.||.|
RBAM_000810__ 351 GATCCAGCAGTATGGCGCCCCCTTAATTGTTGTTGATTTCGGAACGGCGA 400
BSNT_00123___ 383 CAACGTACTGCTATATTGATGAAAACAAACAATACATGGGCGGGGCGATT 432
|.|||||.|||||.|||||||||||||||||||||||||||||.||||||
RBAM_000810__ 401 CGACGTATTGCTACATTGATGAAAACAAACAATACATGGGCGGCGCGATT 450
BSNT_00123___ 433 GCCCCTGGGATTACAATTTCGACAGAGGCGCTTTACTCGCGTGCAGCAAA 482
||.||.||.|||||.|||||.||.||.|||||.|||||.|||||.||.||
RBAM_000810__ 451 GCTCCCGGCATTACGATTTCAACGGAAGCGCTGTACTCACGTGCGGCGAA 500
BSNT_00123___ 483 GCTTCCGCGTATCGAAATCACCCGGCCCGACAATATTATCGGAAAAAACA 532
|||||||.|.||.|||||..||||.||.||||||||.|||||.|||||||
RBAM_000810__ 501 GCTTCCGAGAATTGAAATTGCCCGTCCGGACAATATCATCGGCAAAAACA 550
BSNT_00123___ 533 CTGTTAGCGCGATGCAATCTGGGATTTTATTTGGCTATGTCGGCCAAGTG 582
|.||.|||||.|||||.||.||.||..|.||.||.||||||||.|||||.
RBAM_000810__ 551 CGGTAAGCGCCATGCAGTCCGGCATCCTTTTCGGTTATGTCGGACAAGTT 600
BSNT_00123___ 583 GAAGGAATCGTTAAGCGAATGAAATGGCAGGCAAAACAGGAACCAAAGGT 632
|||||.||.||.|||||.||||||||||||||||.|||||||||.||.||
RBAM_000810__ 601 GAAGGTATAGTGAAGCGGATGAAATGGCAGGCAACACAGGAACCGAAAGT 650
BSNT_00123___ 633 CATTGCGACAGGAGGCCTGGCGCCGCTCATT----GCGAACGAATCAGAT 678
||||||||||||.||.||.||| ||||| ||.|||||||||||.
RBAM_000810__ 651 CATTGCGACAGGCGGGCTTGCG----TCATTAATCGCAAACGAATCAGAC 696
BSNT_00123___ 679 TGTATAGACATCGTTGATCCATTCTTAACCCTAAAAGGGCTGGAATTGAT 728
|||||.||.||.|||||.||.||..|.||.||.||||||||||||.|.||
RBAM_000810__ 697 TGTATTGATATTGTTGACCCGTTTCTCACTCTGAAAGGGCTGGAAATCAT 746
BSNT_00123___ 729 TTATGAAAGAAACCGCGTAGGAAGTGTATAG 759
||||||..||||.|||||.||....||||||
RBAM_000810__ 747 TTATGAGCGAAATCGCGTGGGTCACGTATAG 777
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