Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00115 and RBAM_000750

See DNA alignment / Visit BSNT_00115 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:53
# Commandline: needle
#    -asequence pep-align/BSNT_00115___spoIIE.1.9828.seq
#    -bsequence pep-align/RBAM_000750___spoIIE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00115___spoIIE-RBAM_000750___spoIIE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00115___spoIIE-RBAM_000750___spoIIE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00115___spoIIE
# 2: RBAM_000750___spoIIE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 832
# Identity:     762/832 (91.6%)
# Similarity:   799/832 (96.0%)
# Gaps:           5/832 ( 0.6%)
# Score: 3870.0
# 
#
#=======================================

BSNT_00115___      1 MRGMEKAERRVNGPMAGQALEKLQSFFNRGTKLVTHHLHSLFFYKGFIYV     50
                        ||||||||||||||||||||||||.:..||..|..||||||||||||
RBAM_000750__      1 ---MEKAERRVNGPMAGQALEKLQSFFEKAAKLTVHQAHSLFFYKGFIYV     47

BSNT_00115___     51 VIGFLLGRAFILSEVLPFALPFFGAMLLIRRDKAFYAVLAVLAGALTISP    100
                     |||||||||||||||||||||||||||||||||||||.|::|||||||||
RBAM_000750__     48 VIGFLLGRAFILSEVLPFALPFFGAMLLIRRDKAFYACLSLLAGALTISP     97

BSNT_00115___    101 KHSLLILAALLAFFVFSKVAAFITDDRVKALPIVVFFSMAAARAGFVYAQ    150
                     |||||||.||..|.:|||:..:|..||||.|||||||||||||.||||.:
RBAM_000750__     98 KHSLLILTALAVFTLFSKIGTYIVQDRVKMLPIVVFFSMAAARIGFVYFE    147

BSNT_00115___    151 NGVFTTYDYVMAIVEAGLSFILTLIFLQSLPIFTVKKVKQSLKIEEIICF    200
                     :|.|||||||||:|||||:|||||||||||||||:|||||||||||||||
RBAM_000750__    148 SGAFTTYDYVMAVVEAGLAFILTLIFLQSLPIFTIKKVKQSLKIEEIICF    197

BSNT_00115___    201 MILIASVLTGLAGLSYQGMQAEHILARYVVLSFSFIGGASIGCTVGVVTG    250
                     |||||||||||||:|:|||||||||||||||||||:||||||||||||||
RBAM_000750__    198 MILIASVLTGLAGVSFQGMQAEHILARYVVLSFSFVGGASIGCTVGVVTG    247

BSNT_00115___    251 LILGLANIGNLYQMSLLAFSGLLGGLLKEGKKAGAAIGLIVGSLLISLYG    300
                     ||||||||||||||||||||||||||||||||||||:||::|||||||||
RBAM_000750__    248 LILGLANIGNLYQMSLLAFSGLLGGLLKEGKKAGAAVGLVIGSLLISLYG    297

BSNT_00115___    301 EGSAGLMTTLYESLIAVGLFLLTPQSITRKVARYIPGTVEHLQEQQQYAR    350
                     |||||||||||||||||.|||:||||||:|||||||||.||.||||||||
RBAM_000750__    298 EGSAGLMTTLYESLIAVVLFLITPQSITKKVARYIPGTAEHSQEQQQYAR    347

BSNT_00115___    351 KIRDVTAQKVDQFSNVFHALSESFATFYQ-ASDEQTDDSEVDLFLSKITE    399
                     |||||||||||||||||||||||||||:| :||||.::.|||||||||||
RBAM_000750__    348 KIRDVTAQKVDQFSNVFHALSESFATFHQTSSDEQAEEGEVDLFLSKITE    397

BSNT_00115___    400 HSCQTCYKKNRCWVQNFDKTYDLMKQVMLETEEKEYASNRRLKKEFQQYC    449
                     ||||:||||::|||||||||||||||||.|||||:|||||||||||||:|
RBAM_000750__    398 HSCQSCYKKSKCWVQNFDKTYDLMKQVMHETEEKQYASNRRLKKEFQQHC    447

BSNT_00115___    450 SKSKQVEELIEDELAHHHAHLTLKKKVQDSRRLVAEQLLGVSEVMADFSR    499
                     |||:||||||||||||||||||||:|||||||||||||||||||||||||
RBAM_000750__    448 SKSRQVEELIEDELAHHHAHLTLKRKVQDSRRLVAEQLLGVSEVMADFSR    497

BSNT_00115___    500 EIKREREQHFLQEEQIIEALQHFGIEIQHVEIYSLEQGNIDIEMTIPFS-    548
                     ||||||||||:||||:||||||||||||||||||||||||||||||||| 
RBAM_000750__    498 EIKREREQHFIQEEQMIEALQHFGIEIQHVEIYSLEQGNIDIEMTIPFSG    547

BSNT_00115___    549 GHGESEKIIAPMLSDILEEQILVKAEQHSPHPNGYSHVAFGSTKSYRVST    598
                     ||||||||||||||||||||||||:||||.||||||||||||||||||||
RBAM_000750__    548 GHGESEKIIAPMLSDILEEQILVKSEQHSTHPNGYSHVAFGSTKSYRVST    597

BSNT_00115___    599 GAAHAAKGGGLVSGDSYSMMELGARKYAAAISDGMGNGARAHFESNETIK    648
                     ||||||||||||||||||||||||||||||||||||||||||:|||||||
RBAM_000750__    598 GAAHAAKGGGLVSGDSYSMMELGARKYAAAISDGMGNGARAHYESNETIK    647

BSNT_00115___    649 LLEKILESGIDEKIAIKTINSILSLRTTDEIYSTLDLSIIDLQDASCKFL    698
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000750__    648 LLEKILESGIDEKIAIKTINSILSLRTTDEIYSTLDLSIIDLQDASCKFL    697

BSNT_00115___    699 KVGSTPSFIKRGDQVMKVQASNLPIGIINEFDVEVVSEQLKAGDLLIMMS    748
                     ||||||||||||||||||||||||||||||||||||||||||||||:|||
RBAM_000750__    698 KVGSTPSFIKRGDQVMKVQASNLPIGIINEFDVEVVSEQLKAGDLLVMMS    747

BSNT_00115___    749 DGIFEGPKHVENHDLWMKRKMKGLKTNDPQEIADLLMEEVIRTRSGQIED    798
                     ||||||||||||||||||||||||||.|||||||:|||||||||||||||
RBAM_000750__    748 DGIFEGPKHVENHDLWMKRKMKGLKTEDPQEIADILMEEVIRTRSGQIED    797

BSNT_00115___    799 DMTVVVVRIDHNTPKWASIPVPAIFQNKQEIS    830
                     ||||||||||||||||||||||||||||:|||
RBAM_000750__    798 DMTVVVVRIDHNTPKWASIPVPAIFQNKKEIS    829


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_00115 and RBAM_000750

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
