Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00104 and RBAM_000720

See DNA alignment / Visit BSNT_00104 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:53
# Commandline: needle
#    -asequence pep-align/BSNT_00104___yabR.1.9828.seq
#    -bsequence pep-align/RBAM_000720___yabR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00104___yabR-RBAM_000720___yabR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00104___yabR-RBAM_000720___yabR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00104___yabR
# 2: RBAM_000720___yabR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:     127/128 (99.2%)
# Similarity:   128/128 (100.0%)
# Gaps:           0/128 ( 0.0%)
# Score: 646.0
# 
#
#=======================================

BSNT_00104___      1 MSIEVGSKLQGKITGITNFGAFVELPGGSTGLVHISEVADNYVKDINDHL     50
                     |||||||||||||||||||||||||||||||||||||||||||||||:||
RBAM_000720__      1 MSIEVGSKLQGKITGITNFGAFVELPGGSTGLVHISEVADNYVKDINEHL     50

BSNT_00104___     51 KVGDQVEVKVINVEKDGKIGLSIKKAKDRPQARPRNDFRPKESFEQKMNK    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000720__     51 KVGDQVEVKVINVEKDGKIGLSIKKAKDRPQARPRNDFRPKESFEQKMNK    100

BSNT_00104___    101 FLKDSEDRLSSLKRNTESKRGGRGARRG    128
                     ||||||||||||||||||||||||||||
RBAM_000720__    101 FLKDSEDRLSSLKRNTESKRGGRGARRG    128


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