Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00103 and RBAM_000710

See DNA alignment / Visit BSNT_00103 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:53
# Commandline: needle
#    -asequence pep-align/BSNT_00103___divIC.1.9828.seq
#    -bsequence pep-align/RBAM_000710___divIC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00103___divIC-RBAM_000710___divIC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00103___divIC-RBAM_000710___divIC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00103___divIC
# 2: RBAM_000710___divIC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 125
# Identity:     106/125 (84.8%)
# Similarity:   114/125 (91.2%)
# Gaps:           0/125 ( 0.0%)
# Score: 527.0
# 
#
#=======================================

BSNT_00103___      1 MNFSRERTITEIQNDYKEQVERQNQLKKRRRKGLYRRLTVFGALVFLTAI     50
                     ||.||||||||||||||||||||:||.|||||||:|||.||||||.||||
RBAM_000710__      1 MNLSRERTITEIQNDYKEQVERQSQLMKRRRKGLFRRLIVFGALVLLTAI     50

BSNT_00103___     51 VLASSVWSQTSSLSAKEEKKEQLEKELKSLKTKQTDLKEEISKLKDEDYV    100
                     |||.|:|||||||||.||||.||||::|.|..||.|||:|||||||||||
RBAM_000710__     51 VLAGSLWSQTSSLSANEEKKAQLEKQVKELNAKQADLKDEISKLKDEDYV    100

BSNT_00103___    101 TELARRDLFMSGDGEIIFNVEKKSK    125
                     ||||||||||||:|||:||||||||
RBAM_000710__    101 TELARRDLFMSGNGEILFNVEKKSK    125


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