Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00103 and RBAM_000710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:53
# Commandline: needle
# -asequence dna-align/BSNT_00103___divIC.1.9828.seq
# -bsequence dna-align/RBAM_000710___divIC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00103___divIC-RBAM_000710___divIC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00103___divIC-RBAM_000710___divIC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00103___divIC
# 2: RBAM_000710___divIC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 379
# Identity: 310/379 (81.8%)
# Similarity: 310/379 (81.8%)
# Gaps: 2/379 ( 0.5%)
# Score: 1262.0
#
#
#=======================================
BSNT_00103___ 1 TTGAATTTTTCCAGGGAACGAACGATAACTGAAATACAAAACGACTATAA 50
||||||.|.||.||.|||||.||.|||||||||||.||||||||||||||
RBAM_000710__ 1 TTGAATCTATCTAGAGAACGTACAATAACTGAAATCCAAAACGACTATAA 50
BSNT_00103___ 51 AGAACAAGTAGAACGGCAAAATCAGCTGAAGAAACGAAGACGCAAAGGGC 100
|||.||.||.|||||||||...|||||.|.||||.||||.||.|||||||
RBAM_000710__ 51 AGAGCAGGTTGAACGGCAATCCCAGCTTATGAAAAGAAGGCGGAAAGGGC 100
BSNT_00103___ 101 TGTACAGACGGTTAACTGTATTCGGCGCCCTAGTATTCCTGACGGCAATT 150
|.|.|||||||||.|..||||||||||||||.||.||..|||||||.|||
RBAM_000710__ 101 TTTTCAGACGGTTGATCGTATTCGGCGCCCTTGTGTTGTTGACGGCTATT 150
BSNT_00103___ 151 GTGCTGGCAAGCTCTGTATGGTCCCAAACATCTTCCCTTAGTGCAAAAGA 200
||..|.||..|.|||.|.|||||.||.||.|||||||||||.|||||.||
RBAM_000710__ 151 GTCTTAGCGGGTTCTCTGTGGTCACAGACCTCTTCCCTTAGCGCAAACGA 200
BSNT_00103___ 201 AGAAAAGAAAGAACAGCTTGAAAAAGAACTGAAA-AGTTTAAAGACAAAA 249
|||||||||||..|||||.||||||.||.||||| |.||.||.| |.|||
RBAM_000710__ 201 AGAAAAGAAAGCTCAGCTGGAAAAACAAGTGAAAGAATTGAACG-CGAAA 249
BSNT_00103___ 250 CAAACGGATTTAAAAGAAGAAATATCCAAATTGAAGGATGAGGATTACGT 299
||..|.|||||||||||.|||||.||||||||.|||||||||||||||||
RBAM_000710__ 250 CAGGCTGATTTAAAAGATGAAATTTCCAAATTAAAGGATGAGGATTACGT 299
BSNT_00103___ 300 CACAGAGCTTGCCAGAAGGGACTTATTCATGTCTGGAGACGGAGAAATTA 349
||||||||||||||||||.|||||.||.|||||.|||.|.||.||.|||.
RBAM_000710__ 300 CACAGAGCTTGCCAGAAGAGACTTGTTTATGTCAGGAAATGGTGAGATTC 349
BSNT_00103___ 350 TCTTCAATGTGGAGAAGAAGAGCAAGTAG 378
||||||||||.||.|||||||||||||||
RBAM_000710__ 350 TCTTCAATGTAGAAAAGAAGAGCAAGTAG 378
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