Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00096 and RBAM_000660

See DNA alignment / Visit BSNT_00096 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:53
# Commandline: needle
#    -asequence pep-align/BSNT_00096___yabM.1.9828.seq
#    -bsequence pep-align/RBAM_000660___yabM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00096___yabM-RBAM_000660___yabM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00096___yabM-RBAM_000660___yabM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00096___yabM
# 2: RBAM_000660___yabM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 532
# Identity:     347/532 (65.2%)
# Similarity:   420/532 (78.9%)
# Gaps:           6/532 ( 1.1%)
# Score: 1711.0
# 
#
#=======================================

BSNT_00096___      1 MDDSIGVKRHWIWQGAFVLILAGVITKILSAVYRVPFQNIVGDVGFYIYQ     50
                     |:||:|.||...|:|||||::||::|||||||||||||||||||||||||
RBAM_000660__      1 MNDSVGAKRQSAWKGAFVLVVAGIVTKILSAVYRVPFQNIVGDVGFYIYQ     50

BSNT_00096___     51 QVYPFLGIAVMLSTSGFPVIISKLMNDYSEKNHHTILKISALFLSLIGIL    100
                     |||||||||||||||||||||||||||||: :...|:|||||:::..|::
RBAM_000660__     51 QVYPFLGIAVMLSTSGFPVIISKLMNDYSD-HKQKIMKISALYVTAAGLV     99

BSNT_00096___    101 LFLCLYLGAVPIALFMGDSHLAVLIQVAACAFLLFPFVALLRGGFQGRHE    150
                     ||..:|.||.|:|.||||:.|.:||:|||.||:||||.::.||.|||.|:
RBAM_000660__    100 LFALMYAGAAPLAGFMGDARLVMLIRVAAFAFILFPFTSVFRGYFQGVHD    149

BSNT_00096___    151 MLPSALSQMTEQFLRVAVLLGLSFWLVKKGASLYTAGAAAASGSLAGSLV    200
                     |:||||||:|||.|||||||||||||:|.|.|||.|||.|||||:||||.
RBAM_000660__    150 MMPSALSQITEQLLRVAVLLGLSFWLLKSGRSLYAAGAGAASGSIAGSLA    199

BSNT_00096___    201 ALVILGVFWFKTKRENQTDRQNENVITTKELTKKLLLYSVTICVSSLLLL    250
                     ||.:|.|||:| :.|.:.|..:   |.|..:.|||||||||||:||:|:|
RBAM_000660__    200 ALCVLAVFWYK-REETKKDGGH---IETAVIVKKLLLYSVTICISSVLML    245

BSNT_00096___    251 FIQLVDALNLYALLSGGEASEEAKRLKGIYDRGQPLLQLGSVFAVSIATS    300
                     .||||||||||:|||.|..|..||:|||||||||||||||:|||:|||.|
RBAM_000660__    246 LIQLVDALNLYSLLSDGTESHAAKQLKGIYDRGQPLLQLGTVFAISIAAS    295

BSNT_00096___    301 LVPYISMAVKNKELKIMKEKITSSLKLCLVLGTGASVGLICILKPVNIML    350
                     |||.||.||......|:|||.||::||||.:|.|||.||.|||:||||||
RBAM_000660__    296 LVPSISKAVHENNPFIIKEKATSAVKLCLAVGIGASAGLFCILEPVNIML    345

BSNT_00096___    351 FQNGEGTGALQVFSCSILFASMAVTAAAVLQGAGYTVFPAIAVGAGVAVK    400
                     |||.|||..||:||.||.|||:|:||||:|||||:|||||::|.||.|:|
RBAM_000660__    346 FQNSEGTQTLQIFSLSIFFASIALTAAAILQGAGHTVFPAVSVLAGGALK    395

BSNT_00096___    401 WVLNTLLVPRYGIEGASLATAASFAAVAGLNLYQLRQKEWLDKLRGVLIP    450
                     ||||..|||.:||.||:|||..:|||||.|||.::..|.||..:.||:..
RBAM_000660__    396 WVLNVWLVPGWGITGAALATVLAFAAVACLNLRRIWSKGWLTNIGGVIAR    445

BSNT_00096___    451 IIGSALLMSAVLLAYTRLWTFLFPATGRGAAVIESLSAVAIGGAVFIYCM    500
                     :...:|||...||.|.:||....|.: |..||.|||||..|||.:|||||
RBAM_000660__    446 LCWCSLLMVFFLLVYMKLWQLFLPVS-RAGAVCESLSASVIGGLLFIYCM    494

BSNT_00096___    501 MRLGIFTDEELNSVPFGSKLSKFMRRREQNGG    532
                     :|:.|||||||:.:||||.|||..:|||::|.
RBAM_000660__    495 IRMKIFTDEELSGLPFGSALSKLKKRREKHGR    526


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