Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00093 and RBAM_000630

See DNA alignment / Visit BSNT_00093 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:52
# Commandline: needle
#    -asequence pep-align/BSNT_00093___yabK.1.9828.seq
#    -bsequence pep-align/RBAM_000630___yabK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00093___yabK-RBAM_000630___yabK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00093___yabK-RBAM_000630___yabK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00093___yabK
# 2: RBAM_000630___yabK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 76
# Identity:      66/76 (86.8%)
# Similarity:    71/76 (93.4%)
# Gaps:           0/76 ( 0.0%)
# Score: 371.0
# 
#
#=======================================

BSNT_00093___      1 MALHYYCRHCGVKVGSLESSMVSTDSLGFQHLTNEERNDMISYKENGDVH     50
                     |||||:|||||.||||||.|.|.|.|||||||||||||||||||:|||||
RBAM_000630__      1 MALHYFCRHCGFKVGSLEYSTVPTQSLGFQHLTNEERNDMISYKDNGDVH     50

BSNT_00093___     51 VLTICEDCQEALDRNPHYHEYHTFIQ     76
                     ||||||||||||:|||||||::||||
RBAM_000630__     51 VLTICEDCQEALERNPHYHEHNTFIQ     76


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