Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00093 and RBAM_000630

See Amino acid alignment / Visit BSNT_00093 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:52
# Commandline: needle
#    -asequence dna-align/BSNT_00093___yabK.1.9828.seq
#    -bsequence dna-align/RBAM_000630___yabK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00093___yabK-RBAM_000630___yabK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00093___yabK-RBAM_000630___yabK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00093___yabK
# 2: RBAM_000630___yabK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity:     198/231 (85.7%)
# Similarity:   198/231 (85.7%)
# Gaps:           0/231 ( 0.0%)
# Score: 858.0
# 
#
#=======================================

BSNT_00093___      1 ATGGCTTTGCATTATTATTGTCGTCATTGCGGAGTGAAAGTAGGCAGTCT     50
                     ||||||||||||||||..||.||.||.|||||..|.||.|||||.||.||
RBAM_000630__      1 ATGGCTTTGCATTATTTCTGCCGCCACTGCGGCTTTAAGGTAGGGAGCCT     50

BSNT_00093___     51 CGAATCTTCAATGGTATCGACAGACTCACTTGGATTTCAGCACTTAACAA    100
                     .||||.|||.|.|||..|||||.|.|||||||||||||||||||||||||
RBAM_000630__     51 GGAATATTCGACGGTGCCGACACAGTCACTTGGATTTCAGCACTTAACAA    100

BSNT_00093___    101 ATGAGGAAAGAAACGATATGATTTCTTATAAAGAAAATGGAGATGTCCAT    150
                     |||||||||||||||||||||||||.||||||||.|||||||||||||||
RBAM_000630__    101 ATGAGGAAAGAAACGATATGATTTCATATAAAGACAATGGAGATGTCCAT    150

BSNT_00093___    151 GTTTTGACGATATGTGAAGACTGCCAAGAGGCGCTTGACCGAAATCCGCA    200
                     |||.|.||.||.|||||||||||||||||||||||.||.||.||||||||
RBAM_000630__    151 GTTCTTACAATTTGTGAAGACTGCCAAGAGGCGCTGGAGCGCAATCCGCA    200

BSNT_00093___    201 TTACCACGAATATCACACATTTATTCAATAA    231
                     .|||||.|||.|..|||||||||||||||||
RBAM_000630__    201 CTACCATGAACACAACACATTTATTCAATAA    231


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