Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00087 and RBAM_000590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence pep-align/BSNT_00087___gcaD.1.9828.seq
# -bsequence pep-align/RBAM_000590___gcaD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00087___gcaD-RBAM_000590___gcaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00087___gcaD-RBAM_000590___gcaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00087___gcaD
# 2: RBAM_000590___gcaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity: 409/456 (89.7%)
# Similarity: 435/456 (95.4%)
# Gaps: 0/456 ( 0.0%)
# Score: 2126.0
#
#
#=======================================
BSNT_00087___ 1 MDKRFAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDEALKLSLSKLV 50
|||||||:||||:||||||||||||||||||||||||.||||||||:|||
RBAM_000590__ 1 MDKRFAVILAAGKGTRMKSKLYKVLHPVCGKPMVEHVADEALKLSLAKLV 50
BSNT_00087___ 51 TIVGHGAEEVKKQLGDKSEYALQAEQLGTAHAVKQAQPFLADEKGVTIVI 100
||||||||:||||||.||:|||||||||||||||||:|||..||||||||
RBAM_000590__ 51 TIVGHGAEDVKKQLGQKSDYALQAEQLGTAHAVKQAKPFLHGEKGVTIVI 100
BSNT_00087___ 101 CGDTPLLTAETMEQMLKEHAQREAKATILTAVAEDPTGYGRIIRSENGAV 150
|||||||||||||.||.||..:.||||:|||||:||.|||||||||:|||
RBAM_000590__ 101 CGDTPLLTAETMEAMLNEHTDKGAKATVLTAVADDPAGYGRIIRSEDGAV 150
BSNT_00087___ 151 QKIVEHKDASEEERLVTEINTGTYCFDNEALFRAIDQVSNDNAQGEYYLP 200
|||||||||||:||||.||||||||||||||||.|:||||:|||||||||
RBAM_000590__ 151 QKIVEHKDASEQERLVKEINTGTYCFDNEALFRVIEQVSNENAQGEYYLP 200
BSNT_00087___ 201 DVIEILKNEGETVAAYQTGNFQETLGVNDRVALSQAEQFMKERINKRHMQ 250
|||||||:|||||||||||||||||||||||||||||.:|||||||||||
RBAM_000590__ 201 DVIEILKDEGETVAAYQTGNFQETLGVNDRVALSQAEMYMKERINKRHMQ 250
BSNT_00087___ 251 NGVTLIDPMNTYISPDAVIGSDTVIYPGTVIKGEVQIGEDTIIGPHTEIM 300
|||||||||||||||||.||.|||||||||:||:.:||::.:|||||||.
RBAM_000590__ 251 NGVTLIDPMNTYISPDARIGQDTVIYPGTVLKGQAEIGDECVIGPHTEIE 300
BSNT_00087___ 301 NSAIGSRTVIKQSVVNHSKVGNDVNIGPFAHIRPDSVIGNEVKIGNFVEI 350
:|:|||||||||||||.|||||||||||||||||||.|||||||||||||
RBAM_000590__ 301 DSSIGSRTVIKQSVVNRSKVGNDVNIGPFAHIRPDSAIGNEVKIGNFVEI 350
BSNT_00087___ 351 KKTQFGDRSKASHLSYVGDAEVGTDVNLGCGSITVNYDGKNKYLTKIEDG 400
||||||||||||||||:|||||||||||||||||||||||.|||||||||
RBAM_000590__ 351 KKTQFGDRSKASHLSYIGDAEVGTDVNLGCGSITVNYDGKKKYLTKIEDG 400
BSNT_00087___ 401 AFIGCNSNLVAPVTVGEGAYVAAGSTVTEDVPGKALAIARARQVNKDDYV 450
|||||||||||||||||||||||||||||||||:||||||||||||:|||
RBAM_000590__ 401 AFIGCNSNLVAPVTVGEGAYVAAGSTVTEDVPGEALAIARARQVNKEDYV 450
BSNT_00087___ 451 KNIHKK 456
||||||
RBAM_000590__ 451 KNIHKK 456
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