Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00085 and RBAM_000580

See DNA alignment / Visit BSNT_00085 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:51
# Commandline: needle
#    -asequence pep-align/BSNT_00085.1.9828.seq
#    -bsequence pep-align/RBAM_000580___spoVG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00085-RBAM_000580___spoVG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00085-RBAM_000580___spoVG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00085
# 2: RBAM_000580___spoVG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 97
# Identity:      79/97 (81.4%)
# Similarity:    81/97 (83.5%)
# Gaps:          16/97 (16.5%)
# Score: 409.0
# 
#
#=======================================

BSNT_00085         1 ----------------MRAIASITLDHEFVVHDIRVIDGNNGLFVAMPSK     34
                                     ||||||||||||||||||||||||||||||||||
RBAM_000580__      1 MEVTDVRLRRVNTDGRMRAIASITLDHEFVVHDIRVIDGNNGLFVAMPSK     50

BSNT_00085        35 RTPDGEFRDIAHPINSSTRGKIQDAVLNEYHRLGDTEALEFEEAGAS     81
                     |||||||||||||||||||||||||||||||||||:||||:||||||
RBAM_000580__     51 RTPDGEFRDIAHPINSSTRGKIQDAVLNEYHRLGDSEALEYEEAGAS     97


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