Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00084 and RBAM_000570

See DNA alignment / Visit BSNT_00084 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:51
# Commandline: needle
#    -asequence pep-align/BSNT_00084___yabJ.1.9828.seq
#    -bsequence pep-align/RBAM_000570___yabJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00084___yabJ-RBAM_000570___yabJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00084___yabJ-RBAM_000570___yabJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00084___yabJ
# 2: RBAM_000570___yabJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 126
# Identity:     118/126 (93.7%)
# Similarity:   120/126 (95.2%)
# Gaps:           1/126 ( 0.8%)
# Score: 599.0
# 
#
#=======================================

BSNT_00084___      1 MTKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQT     50
                     ||||:|||||||||||||||||||||||||||||||..||||||||.|||
RBAM_000570__      1 MTKAIHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTAEGEMVNGDITEQT     50

BSNT_00084___     51 HQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHKP    100
                     |||||||||||:|||||.||||||||||||||||||||||||||||.|||
RBAM_000570__     51 HQVFSNLKAVLKEAGASLETVVKATVFIADMEQFAEVNEVYGQYFDVHKP    100

BSNT_00084___    101 ARSCVEVARLPKDALVEIEVIALVK-    125
                     ||||||||||||||||||||||||| 
RBAM_000570__    101 ARSCVEVARLPKDALVEIEVIALVKS    126


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