Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00084 and RBAM_000570

See Amino acid alignment / Visit BSNT_00084 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:51
# Commandline: needle
#    -asequence dna-align/BSNT_00084___yabJ.1.9828.seq
#    -bsequence dna-align/RBAM_000570___yabJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00084___yabJ-RBAM_000570___yabJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00084___yabJ-RBAM_000570___yabJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00084___yabJ
# 2: RBAM_000570___yabJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 381
# Identity:     311/381 (81.6%)
# Similarity:   311/381 (81.6%)
# Gaps:           3/381 ( 0.8%)
# Score: 1276.0
# 
#
#=======================================

BSNT_00084___      1 ATGACAAAAGCAGTCCACACAAAACATGCGCCAGCGGCAATCGGGCCTTA     50
                     ||||||||||||.||||.||||||||.|||||.||.||.||||||||.||
RBAM_000570__      1 ATGACAAAAGCAATCCATACAAAACACGCGCCGGCAGCGATCGGGCCATA     50

BSNT_00084___     51 TTCACAAGGGATTATCGTCAACAATATGTTTTACAGCTCAGGCCAAATCC    100
                     ||||||.||.||.|||||.|||||.||||||||||||||||||||.||.|
RBAM_000570__     51 TTCACAGGGAATCATCGTAAACAACATGTTTTACAGCTCAGGCCAGATTC    100

BSNT_00084___    101 CTTTGACTCCTTCAGGCGAAATGGTGAACGGCGATATTAAGGAGCAGACT    150
                     ||.|.|||.||..|||.||||||||.|||||.|||||.|..||.||.||.
RBAM_000570__    101 CTCTTACTGCTGAAGGAGAAATGGTAAACGGTGATATCACAGAACAAACG    150

BSNT_00084___    151 CATCAAGTATTCAGCAATTTAAAGGCGGTTCTGGAAGAAGCGGGTGCTTC    200
                     |||||.||.||||||||||||||.||.||.|||.||||||||||.|||||
RBAM_000570__    151 CATCAGGTGTTCAGCAATTTAAAAGCTGTGCTGAAAGAAGCGGGCGCTTC    200

BSNT_00084___    201 TTTTGAAACAGTTGTAAAAGCAACTGTATTTATCGCGGATATGGAACAGT    250
                     |.|.||.||.|||||.||||||||.||.|||||.||.||||||||.||||
RBAM_000570__    201 TCTCGAGACGGTTGTCAAAGCAACGGTGTTTATTGCTGATATGGAGCAGT    250

BSNT_00084___    251 TTGCGGAAGTAAACGAAGTGTACGGACAATACTTTGACACTCACAAACCG    300
                     ||||||||||.||.|||||||||||||||||||||||....||.||.|||
RBAM_000570__    251 TTGCGGAAGTGAATGAAGTGTACGGACAATACTTTGATGTACATAAGCCG    300

BSNT_00084___    301 GCGAGATCTTGTGTTGAAGTCGCGAGACTCCCGAAGGATGCGTTAGTCGA    350
                     ||.||.||||||||.|||||.||||||||.|||||.||.||..|.||.||
RBAM_000570__    301 GCAAGGTCTTGTGTGGAAGTGGCGAGACTGCCGAAAGACGCTCTCGTGGA    350

BSNT_00084___    351 GATTGAAGTTATTGCACTGGTGAAA---TAA    378
                     .||||||||.|||||.|||||||||   |||
RBAM_000570__    351 AATTGAAGTCATTGCGCTGGTGAAATCTTAA    381


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