Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00084 and RBAM_000570
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence dna-align/BSNT_00084___yabJ.1.9828.seq
# -bsequence dna-align/RBAM_000570___yabJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00084___yabJ-RBAM_000570___yabJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00084___yabJ-RBAM_000570___yabJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00084___yabJ
# 2: RBAM_000570___yabJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 381
# Identity: 311/381 (81.6%)
# Similarity: 311/381 (81.6%)
# Gaps: 3/381 ( 0.8%)
# Score: 1276.0
#
#
#=======================================
BSNT_00084___ 1 ATGACAAAAGCAGTCCACACAAAACATGCGCCAGCGGCAATCGGGCCTTA 50
||||||||||||.||||.||||||||.|||||.||.||.||||||||.||
RBAM_000570__ 1 ATGACAAAAGCAATCCATACAAAACACGCGCCGGCAGCGATCGGGCCATA 50
BSNT_00084___ 51 TTCACAAGGGATTATCGTCAACAATATGTTTTACAGCTCAGGCCAAATCC 100
||||||.||.||.|||||.|||||.||||||||||||||||||||.||.|
RBAM_000570__ 51 TTCACAGGGAATCATCGTAAACAACATGTTTTACAGCTCAGGCCAGATTC 100
BSNT_00084___ 101 CTTTGACTCCTTCAGGCGAAATGGTGAACGGCGATATTAAGGAGCAGACT 150
||.|.|||.||..|||.||||||||.|||||.|||||.|..||.||.||.
RBAM_000570__ 101 CTCTTACTGCTGAAGGAGAAATGGTAAACGGTGATATCACAGAACAAACG 150
BSNT_00084___ 151 CATCAAGTATTCAGCAATTTAAAGGCGGTTCTGGAAGAAGCGGGTGCTTC 200
|||||.||.||||||||||||||.||.||.|||.||||||||||.|||||
RBAM_000570__ 151 CATCAGGTGTTCAGCAATTTAAAAGCTGTGCTGAAAGAAGCGGGCGCTTC 200
BSNT_00084___ 201 TTTTGAAACAGTTGTAAAAGCAACTGTATTTATCGCGGATATGGAACAGT 250
|.|.||.||.|||||.||||||||.||.|||||.||.||||||||.||||
RBAM_000570__ 201 TCTCGAGACGGTTGTCAAAGCAACGGTGTTTATTGCTGATATGGAGCAGT 250
BSNT_00084___ 251 TTGCGGAAGTAAACGAAGTGTACGGACAATACTTTGACACTCACAAACCG 300
||||||||||.||.|||||||||||||||||||||||....||.||.|||
RBAM_000570__ 251 TTGCGGAAGTGAATGAAGTGTACGGACAATACTTTGATGTACATAAGCCG 300
BSNT_00084___ 301 GCGAGATCTTGTGTTGAAGTCGCGAGACTCCCGAAGGATGCGTTAGTCGA 350
||.||.||||||||.|||||.||||||||.|||||.||.||..|.||.||
RBAM_000570__ 301 GCAAGGTCTTGTGTGGAAGTGGCGAGACTGCCGAAAGACGCTCTCGTGGA 350
BSNT_00084___ 351 GATTGAAGTTATTGCACTGGTGAAA---TAA 378
.||||||||.|||||.||||||||| |||
RBAM_000570__ 351 AATTGAAGTCATTGCGCTGGTGAAATCTTAA 381
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