Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00082 and RBAM_000550

See DNA alignment / Visit BSNT_00082 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:51
# Commandline: needle
#    -asequence pep-align/BSNT_00082___ispE.1.9828.seq
#    -bsequence pep-align/RBAM_000550___ipk.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00082___ispE-RBAM_000550___ipk.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00082___ispE-RBAM_000550___ipk.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00082___ispE
# 2: RBAM_000550___ipk
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     258/292 (88.4%)
# Similarity:   273/292 (93.5%)
# Gaps:           3/292 ( 1.0%)
# Score: 1331.0
# 
#
#=======================================

BSNT_00082___      1 MKAMRILEKAPAKINLSLDVTRKRPDGYHEVEMIMTTIDLADRIELTELA     50
                        ||||||||||||||||||.|||||||||||||||||||||||||||.
RBAM_000550__      1 ---MRILEKAPAKINLSLDVTSKRPDGYHEVEMIMTTIDLADRIELTELP     47

BSNT_00082___     51 EDEVRVSSHNRFVPDDQRNLAYQAAKLIKDRYNVKKGVSIMITKVIPVAA    100
                     |:.:||:||||||||||||||||||||:|:|:.|||||||||||||||||
RBAM_000550__     48 ENVIRVASHNRFVPDDQRNLAYQAAKLLKERFQVKKGVSIMITKVIPVAA     97

BSNT_00082___    101 GLAGGSSDAAATLRGLNRLWNLNLSAETLAELGAEIGSDVSFCVYGGTAL    150
                     ||||||||||||||||||||:|.||.|.||||||||||||||||||||||
RBAM_000550__     98 GLAGGSSDAAATLRGLNRLWDLKLSVEELAELGAEIGSDVSFCVYGGTAL    147

BSNT_00082___    151 ATGRGEKIKHISTPPHCWVILAKPTIGVSTAEVYRALKLDGIEHPDVQGM    200
                     ||||||||:|||.||||||:|||||||||||||||.|.|..:.|||||.|
RBAM_000550__    148 ATGRGEKIRHISAPPHCWVVLAKPTIGVSTAEVYRRLNLQQVRHPDVQAM    197

BSNT_00082___    201 IEAIEEKSFQEMCSRLGNVLESVTLDMHPEVAMIKNQMKRFGADAVLMSG    250
                     |:||||||||::|.:||||||||||.:|||||||||||||||||||||||
RBAM_000550__    198 IDAIEEKSFQKVCGQLGNVLESVTLSLHPEVAMIKNQMKRFGADAVLMSG    247

BSNT_00082___    251 SGPTVFGLVQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD    292
                     ||||||||||||||||||||||||||||||||||||||||||
RBAM_000550__    248 SGPTVFGLVQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD    289


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