Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00082 and RBAM_000550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence dna-align/BSNT_00082___ispE.1.9828.seq
# -bsequence dna-align/RBAM_000550___ipk.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00082___ispE-RBAM_000550___ipk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00082___ispE-RBAM_000550___ipk.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00082___ispE
# 2: RBAM_000550___ipk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 883
# Identity: 679/883 (76.9%)
# Similarity: 679/883 (76.9%)
# Gaps: 17/883 ( 1.9%)
# Score: 2586.0
#
#
#=======================================
BSNT_00082___ 1 GTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAGATCAATCTGTC 50
|||||||||||||||||||||||.||.||.|||||||||||
RBAM_000550__ 1 ---------ATGCGTATTTTAGAAAAAGCGCCGGCCAAAATCAATCTGTC 41
BSNT_00082___ 51 ACTTGACGTCACCCGAAAACGCCCGGATGGCTATCATGAAGTCGAAATGA 100
.||.||.||.||..|.||||||||||||||.|||||.|||||.||.||||
RBAM_000550__ 42 CCTCGATGTGACAAGTAAACGCCCGGATGGTTATCACGAAGTGGAGATGA 91
BSNT_00082___ 101 TCATGACGACAATTGATTTAGCTGATCGAATTGAATTGACGGAGCTTGCA 150
|||||||||||||||||||.||.|||||.||||||.||||.||.||..|.
RBAM_000550__ 92 TCATGACGACAATTGATTTGGCAGATCGGATTGAACTGACAGAACTGCCC 141
BSNT_00082___ 151 GAGGATGAAGTGAGGGTTTCCTCCCACAACCGATTTGTGCCTGATGACCA 200
||..|.|...|.||.||..|.||.||.||.||.|||||.||.|||||.||
RBAM_000550__ 142 GAAAACGTTATCAGAGTGGCGTCGCATAATCGCTTTGTTCCGGATGATCA 191
BSNT_00082___ 201 AAGAAACTTAGCTTATCAGGCTGCCAAGCTGATCAAGGACAGA-TACAAC 249
|||.||..|.|||||||||||.|||||.|||.|.||.||..|| |.|||
RBAM_000550__ 192 AAGGAATCTGGCTTATCAGGCAGCCAAACTGCTTAAAGAACGATTTCAA- 240
BSNT_00082___ 250 GTGAAAAAGGGAGTTTCCATCATGATTACGAAGGTAATTCCGGTGGCTGC 299
||.|||||.||.||||||||.||||||||.||.||.||.||.||.||.||
RBAM_000550__ 241 GTCAAAAAAGGCGTTTCCATTATGATTACAAAAGTGATCCCTGTAGCGGC 290
BSNT_00082___ 300 CGGTCTTGCCGGCGGGAGCAGTGATGCGGCGGCGACGCTCAGAGGGCTGA 349
.||.|||||||||||.|||||.||||||||.||.||||||||||||||||
RBAM_000550__ 291 AGGGCTTGCCGGCGGAAGCAGCGATGCGGCAGCCACGCTCAGAGGGCTGA 340
BSNT_00082___ 350 ACAGACTGTGGAATTTAAATCTGTCTGCGGAAACGCTTGCTGAGCTTGGA 399
||||.||.|||.|||||||.||.||||..|||..|||.||.|||||||||
RBAM_000550__ 341 ACAGGCTTTGGGATTTAAAGCTTTCTGTCGAAGAGCTCGCGGAGCTTGGA 390
BSNT_00082___ 400 GCGGAAATTGGCTCTGACGTTTCATTTTGTGTCTATGGCGGAACTGCATT 449
||.|||||.||.||.|||||.||.||.|||||.||.||.||.|||||..|
RBAM_000550__ 391 GCTGAAATCGGTTCAGACGTGTCCTTCTGTGTATACGGAGGCACTGCCCT 440
BSNT_00082___ 450 AGCAACAGGGCGCGGCGAGAAAATTAAACATATCAGCACGCCTCCGCACT 499
.|||||.||.|||||.|||||.||.|..||.|||||..|.||.||.||.|
RBAM_000550__ 441 GGCAACCGGACGCGGTGAGAAGATCAGGCACATCAGTGCTCCGCCTCATT 490
BSNT_00082___ 500 GCTGGGTCATTTTAGCGAAGCCGACTATCGGTGTTTCAACTGCTGAAGTG 549
||||||||.|..|.||.||.|||||.|||||.||.||||||||.||||||
RBAM_000550__ 491 GCTGGGTCGTGCTTGCCAAACCGACGATCGGGGTATCAACTGCCGAAGTG 540
BSNT_00082___ 550 TACAGAGCGCTGAA---ACTGGATGGTATAGAGCATCCCGATGTACAAGG 596
|||.|...|||||| ||.|.| ||| |.| ||||||.|||||.||.|.
RBAM_000550__ 541 TACCGCCGGCTGAACTTACAGCA-GGT-TCG-GCATCCTGATGTGCAGGC 587
BSNT_00082___ 597 AATGATCGAGGCGATAGAAGAAAAGAGTTTTCAGGAGATGTGCAGCCGTT 646
.|||||.||.|||||.||||||||.||.||.||..||.|.|||.|.|..|
RBAM_000550__ 588 GATGATTGACGCGATTGAAGAAAAAAGCTTCCAAAAGGTATGCGGACAAT 637
BSNT_00082___ 647 TAGGCAATGTGCTTGAATCTGTTACGCTCGATATGCATCCTGAAGTTGCA 696
||||.||.||..|.||.||.|||||||||....|.|||||.||.||.||.
RBAM_000550__ 638 TAGGAAACGTATTGGAGTCAGTTACGCTCAGCCTCCATCCCGAGGTGGCG 687
BSNT_00082___ 697 ATGATCAAAAACCAGATGAAACGCTTTGGTGCAGATGCCGTGTTAATGAG 746
|||||.|||||.||.|||||||||||.||.||.|||||.|||||||||||
RBAM_000550__ 688 ATGATTAAAAATCAAATGAAACGCTTCGGCGCTGATGCGGTGTTAATGAG 737
BSNT_00082___ 747 CGGGAGCGGCCCGACAGTGTTTGGACTGGTTCAGTATGAGTCGAAGGTGC 796
|||.|||||.|||||.||.||.||..|||||||.||.||.||||||||||
RBAM_000550__ 738 CGGAAGCGGACCGACTGTATTCGGTTTGGTTCAATACGAATCGAAGGTGC 787
BSNT_00082___ 797 AGAGAATTTATAACGGGTTAAGAGGCTTCTGCGATCAAGTTTATGCGGTG 846
||.|.||||||||||||||||||||.|||||.||||||||.||.||||||
RBAM_000550__ 788 AGCGGATTTATAACGGGTTAAGAGGTTTCTGTGATCAAGTGTACGCGGTG 837
BSNT_00082___ 847 AGAATGATCGGCGAACAGAACGCTCTTGATTAA 879
.|.|||||||||||||||||.||||||||||||
RBAM_000550__ 838 CGGATGATCGGCGAACAGAATGCTCTTGATTAA 870
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