Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00076 and RBAM_000500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence pep-align/BSNT_00076___rnmV.1.9828.seq
# -bsequence pep-align/RBAM_000500___rnmV.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00076___rnmV-RBAM_000500___rnmV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00076___rnmV-RBAM_000500___rnmV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00076___rnmV
# 2: RBAM_000500___rnmV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity: 166/187 (88.8%)
# Similarity: 177/187 (94.7%)
# Gaps: 1/187 ( 0.5%)
# Score: 842.0
#
#
#=======================================
BSNT_00076___ 1 MKIKEIIVVEGRDDTARIKLAVDADTIETNGSAIDDHVIDQIRLAQKTRG 50
||||||||||||||||||||||||||||||||||.|.||.||||||:|||
RBAM_000500__ 1 MKIKEIIVVEGRDDTARIKLAVDADTIETNGSAIGDEVIRQIRLAQETRG 50
BSNT_00076___ 51 VIILTDPDFPGEKIRKTISEAVPGCKHAFLPKHLAKPKNKRGIGVEHASV 100
||:||||||||||||||||||||||||||||||||||||||||||||||:
RBAM_000500__ 51 VIVLTDPDFPGEKIRKTISEAVPGCKHAFLPKHLAKPKNKRGIGVEHASI 100
BSNT_00076___ 101 ESIRACLENVHEEMEAQPSDISAEDLIHAGLIGGHAAKCRRERLGDLLKI 150
||||||||||||||||:||:|||||:|.||||||.|||.|||||||||||
RBAM_000500__ 101 ESIRACLENVHEEMEAKPSEISAEDVIQAGLIGGPAAKRRRERLGDLLKI 150
BSNT_00076___ 151 GYTNGKQLQKRLQMFQIKKSDFMSALDTVMREEQNE- 186
||||||||||||||||||:|||:.|||.:.:|||:|
RBAM_000500__ 151 GYTNGKQLQKRLQMFQIKRSDFIDALDAMRQEEQDEQ 187
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