Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00071 and RBAM_000460

See DNA alignment / Visit BSNT_00071 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:50
# Commandline: needle
#    -asequence pep-align/BSNT_00071___abrB.1.9828.seq
#    -bsequence pep-align/RBAM_000460___abrB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00071___abrB-RBAM_000460___abrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00071___abrB-RBAM_000460___abrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00071___abrB
# 2: RBAM_000460___abrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 94
# Identity:      93/94 (98.9%)
# Similarity:    93/94 (98.9%)
# Gaps:           0/94 ( 0.0%)
# Score: 456.0
# 
#
#=======================================

BSNT_00071___      1 MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKP     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000460__      1 MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKP     50

BSNT_00071___     51 NMTCQVTGEVSDDNLKLAGGKLVLSKEGAEQIISEIQNQLQNLK     94
                     ||||||||||||||||||||||||||||||||||||||||||.|
RBAM_000460__     51 NMTCQVTGEVSDDNLKLAGGKLVLSKEGAEQIISEIQNQLQNQK     94


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.