Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00071 and RBAM_000460

See Amino acid alignment / Visit BSNT_00071 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:50
# Commandline: needle
#    -asequence dna-align/BSNT_00071___abrB.1.9828.seq
#    -bsequence dna-align/RBAM_000460___abrB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00071___abrB-RBAM_000460___abrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00071___abrB-RBAM_000460___abrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00071___abrB
# 2: RBAM_000460___abrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     261/285 (91.6%)
# Similarity:   261/285 (91.6%)
# Gaps:           0/285 ( 0.0%)
# Score: 1209.0
# 
#
#=======================================

BSNT_00071___      1 ATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGT     50
                     |||||||||||||||||.||||||||||||||||||.|.|||||.||.||
RBAM_000460__      1 ATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGT     50

BSNT_00071___     51 TATTCCTATCGAACTGCGTCGTACTCTTGGAATCGCAGAAAAAGATGCTC    100
                     |||.|||||||||||.||.|||||.||.||.||||||||||||||.||||
RBAM_000460__     51 TATCCCTATCGAACTTCGCCGTACACTGGGCATCGCAGAAAAAGACGCTC    100

BSNT_00071___    101 TTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCA    150
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
RBAM_000460__    101 TTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCA    150

BSNT_00071___    151 AACATGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000460__    151 AACATGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACT    200

BSNT_00071___    201 TGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGCGCTGAGCAAATCATCA    250
                     |||.|||||.||||||||.||.||.||||||||||||||||||||||||.
RBAM_000460__    201 TGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGCGCTGAGCAAATCATCT    250

BSNT_00071___    251 GCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA    285
                     ..|||||.|||||||||||||||||||..||||||
RBAM_000460__    251 CTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA    285


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