Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00068 and RBAM_000430

See DNA alignment / Visit BSNT_00068 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:50
# Commandline: needle
#    -asequence pep-align/BSNT_00068___yabB.1.9828.seq
#    -bsequence pep-align/RBAM_000430___yabB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00068___yabB-RBAM_000430___yabB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00068___yabB-RBAM_000430___yabB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00068___yabB
# 2: RBAM_000430___yabB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     227/247 (91.9%)
# Similarity:   238/247 (96.4%)
# Gaps:           0/247 ( 0.0%)
# Score: 1181.0
# 
#
#=======================================

BSNT_00068___      1 MVSLHDDERLDYLLAEDMKIIQSPTVFAFSLDAVLLSKFAYVPIQKGKIV     50
                     ||||.|||||||||||||||:||||||||||||||||||||||||||.||
RBAM_000430__      1 MVSLRDDERLDYLLAEDMKIVQSPTVFAFSLDAVLLSKFAYVPIQKGNIV     50

BSNT_00068___     51 DLCTGNGIVPLLLSTRSKADILGVEIQERLHDMAVRSVEYNKLDDQIQII    100
                     |||||||||||||||||||||.||||||||:|||:||||||.|..||.:|
RBAM_000430__     51 DLCTGNGIVPLLLSTRSKADITGVEIQERLYDMALRSVEYNGLGGQISLI    100

BSNT_00068___    101 HDDLKNMPEKLGHNRYDVVTCNPPYFKTPKQTEQNMNEHLRIARHEIHCT    150
                     |||||||||:||||:|||||||||||||||:.|||:|||||||||||.||
RBAM_000430__    101 HDDLKNMPERLGHNKYDVVTCNPPYFKTPKEAEQNLNEHLRIARHEILCT    150

BSNT_00068___    151 LEDVISVSSKLLKQGGKAALVHRPGRLLEIFELMKAYQIEPKRVQFVYPK    200
                     |||||||||||||||||||||||||||||||||||||:||||||||:|||
RBAM_000430__    151 LEDVISVSSKLLKQGGKAALVHRPGRLLEIFELMKAYRIEPKRVQFIYPK    200

BSNT_00068___    201 QGKEANTILVEGIKGGRPDLKILPPLFVYDEQNEYTKEIRTILYGDK    247
                     |||||||||||||||||||||||||||||:|||||||||||||||||
RBAM_000430__    201 QGKEANTILVEGIKGGRPDLKILPPLFVYNEQNEYTKEIRTILYGDK    247


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