Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00068 and RBAM_000430

See Amino acid alignment / Visit BSNT_00068 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:50
# Commandline: needle
#    -asequence dna-align/BSNT_00068___yabB.1.9828.seq
#    -bsequence dna-align/RBAM_000430___yabB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00068___yabB-RBAM_000430___yabB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00068___yabB-RBAM_000430___yabB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00068___yabB
# 2: RBAM_000430___yabB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 747
# Identity:     614/747 (82.2%)
# Similarity:   614/747 (82.2%)
# Gaps:           6/747 ( 0.8%)
# Score: 2502.0
# 
#
#=======================================

BSNT_00068___      1 ATGGTTTCATTACATGATGATGAAAGATTAGATTATTTGCTGGCAGAGGA     50
                     |||||||||||||.|||||||||||||||.|||||.||..|.||||||||
RBAM_000430__      1 ATGGTTTCATTACGTGATGATGAAAGATTGGATTACTTATTAGCAGAGGA     50

BSNT_00068___     51 CATGAAAATCATACAAAGCCCAACAGTGTTTGCTTTTTCGTTGGACGCTG    100
                     .||||||||..||||.||.||.||.||.||.||||||||.||.||.||.|
RBAM_000430__     51 TATGAAAATAGTACAGAGTCCGACGGTTTTCGCTTTTTCATTAGATGCCG    100

BSNT_00068___    101 TGCTTCTGTCCAAATTTGCGTACGTTCCGATTCAAAAAGGGAAA-ATTGT    149
                     ||||.|||||.||.|||||.||||||||||||| |||||||||| ||.||
RBAM_000430__    101 TGCTGCTGTCTAAGTTTGCATACGTTCCGATTC-AAAAGGGAAACATCGT    149

BSNT_00068___    150 TGATTTATGCACCGGCAATGGTATTGTGCCGCTGCTGCTCAGTACAAGAT    199
                     ||||||||||||.||.||.||.|||||||||||..|||||||.|||||.|
RBAM_000430__    150 TGATTTATGCACGGGGAACGGCATTGTGCCGCTTTTGCTCAGCACAAGGT    199

BSNT_00068___    200 CAAAAGCAGACAT-TCTGGGAGTCGAAATTCAAGAAAGGCTGCATGATAT    248
                     |||||||.||.|| .|.||| ||.||||||||.|||.|..||.|||||||
RBAM_000430__    200 CAAAAGCCGATATCACCGGG-GTTGAAATTCAGGAACGCTTGTATGATAT    248

BSNT_00068___    249 GGCTGTTCGCAGCGTGGAGTATAATAAGCTGGACGATCAGATCCAG-ATC    297
                     |||..|.||.||||||||.||.||...|||||.||.|||||| ||| .||
RBAM_000430__    249 GGCGCTCCGAAGCGTGGAATACAACGGGCTGGGCGGTCAGAT-CAGTCTC    297

BSNT_00068___    298 ATACATGATGACCTGAAAAACATGCCGGAGAAACTTGGACATAATCGATA    347
                     ||.||||||||.||||||||.||||||||.|.|||.|||||||||..|||
RBAM_000430__    298 ATTCATGATGATCTGAAAAATATGCCGGAAAGACTCGGACATAATAAATA    347

BSNT_00068___    348 TGATGTTGTCACCTGCAATCCGCCGTATTTTAAAACGCCGAAACAAACTG    397
                     ||||||||||||||||||||||||.|||||||||||.||||||.|..|.|
RBAM_000430__    348 TGATGTTGTCACCTGCAATCCGCCTTATTTTAAAACACCGAAAGAGGCGG    397

BSNT_00068___    398 AACAAAACATGAACGAGCATCTCCGAATCGCAAGACATGAAATCCACTGC    447
                     |.||.|||.||||||||||||||.||||||||||.||.|||||||..|||
RBAM_000430__    398 AGCAGAACCTGAACGAGCATCTCAGAATCGCAAGGCACGAAATCCTTTGC    447

BSNT_00068___    448 ACGCTGGAGGATGTCATTTCAGTCAGCAGCAAGCTGCTCAAGCAAGGGGG    497
                     |||||.||.|||||.|||||.|||||||||||.|||||.||||||||.||
RBAM_000430__    448 ACGCTTGAAGATGTGATTTCCGTCAGCAGCAAACTGCTGAAGCAAGGCGG    497

BSNT_00068___    498 AAAAGCAGCTCTTGTTCACCGGCCGGGAAGGCTTCTGGAGATTTTTGAAC    547
                     ||||||.|||||.|||||.||||||||.||||||.||||.||.||||||.
RBAM_000430__    498 AAAAGCGGCTCTCGTTCATCGGCCGGGGAGGCTTTTGGAAATCTTTGAAT    547

BSNT_00068___    548 TGATGAAGGCTTATCAAATCGAGCCAAAACGTGTACAATTTGTCTATCCG    597
                     |.|||||.||.||.|.|||.||.||.|||||.||.||.|||.|.||||||
RBAM_000430__    548 TAATGAAAGCGTACCGAATAGAACCGAAACGGGTTCAGTTTATTTATCCG    597

BSNT_00068___    598 AAGCAAGGGAAAGAAGCCAATACCATTTTGGTTGAAGGTATCAAAGGCGG    647
                     ||.|||||.||||||||.||||||||||||||||||||.||.||||||||
RBAM_000430__    598 AAACAAGGTAAAGAAGCGAATACCATTTTGGTTGAAGGAATTAAAGGCGG    647

BSNT_00068___    648 GCGTCCGGATTTAAAAATTCTTCCTCCTTTATTCGTTTATGATGAACAAA    697
                     .||.||.|||.|.|||||||||||.||..|.|||||.||..|||||||||
RBAM_000430__    648 CCGCCCTGATCTCAAAATTCTTCCCCCGCTGTTCGTATACAATGAACAAA    697

BSNT_00068___    698 ATGAATATACAAAAGAAATCAGGACCATTTTATATGGAGACAAATAA    744
                     ||||||||||.|||||.|||.|.||.||||||||||||||||||||.
RBAM_000430__    698 ATGAATATACGAAAGAGATCCGCACGATTTTATATGGAGACAAATAG    744


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