Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00068 and RBAM_000430
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:50
# Commandline: needle
# -asequence dna-align/BSNT_00068___yabB.1.9828.seq
# -bsequence dna-align/RBAM_000430___yabB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00068___yabB-RBAM_000430___yabB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00068___yabB-RBAM_000430___yabB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00068___yabB
# 2: RBAM_000430___yabB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 747
# Identity: 614/747 (82.2%)
# Similarity: 614/747 (82.2%)
# Gaps: 6/747 ( 0.8%)
# Score: 2502.0
#
#
#=======================================
BSNT_00068___ 1 ATGGTTTCATTACATGATGATGAAAGATTAGATTATTTGCTGGCAGAGGA 50
|||||||||||||.|||||||||||||||.|||||.||..|.||||||||
RBAM_000430__ 1 ATGGTTTCATTACGTGATGATGAAAGATTGGATTACTTATTAGCAGAGGA 50
BSNT_00068___ 51 CATGAAAATCATACAAAGCCCAACAGTGTTTGCTTTTTCGTTGGACGCTG 100
.||||||||..||||.||.||.||.||.||.||||||||.||.||.||.|
RBAM_000430__ 51 TATGAAAATAGTACAGAGTCCGACGGTTTTCGCTTTTTCATTAGATGCCG 100
BSNT_00068___ 101 TGCTTCTGTCCAAATTTGCGTACGTTCCGATTCAAAAAGGGAAA-ATTGT 149
||||.|||||.||.|||||.||||||||||||| |||||||||| ||.||
RBAM_000430__ 101 TGCTGCTGTCTAAGTTTGCATACGTTCCGATTC-AAAAGGGAAACATCGT 149
BSNT_00068___ 150 TGATTTATGCACCGGCAATGGTATTGTGCCGCTGCTGCTCAGTACAAGAT 199
||||||||||||.||.||.||.|||||||||||..|||||||.|||||.|
RBAM_000430__ 150 TGATTTATGCACGGGGAACGGCATTGTGCCGCTTTTGCTCAGCACAAGGT 199
BSNT_00068___ 200 CAAAAGCAGACAT-TCTGGGAGTCGAAATTCAAGAAAGGCTGCATGATAT 248
|||||||.||.|| .|.||| ||.||||||||.|||.|..||.|||||||
RBAM_000430__ 200 CAAAAGCCGATATCACCGGG-GTTGAAATTCAGGAACGCTTGTATGATAT 248
BSNT_00068___ 249 GGCTGTTCGCAGCGTGGAGTATAATAAGCTGGACGATCAGATCCAG-ATC 297
|||..|.||.||||||||.||.||...|||||.||.|||||| ||| .||
RBAM_000430__ 249 GGCGCTCCGAAGCGTGGAATACAACGGGCTGGGCGGTCAGAT-CAGTCTC 297
BSNT_00068___ 298 ATACATGATGACCTGAAAAACATGCCGGAGAAACTTGGACATAATCGATA 347
||.||||||||.||||||||.||||||||.|.|||.|||||||||..|||
RBAM_000430__ 298 ATTCATGATGATCTGAAAAATATGCCGGAAAGACTCGGACATAATAAATA 347
BSNT_00068___ 348 TGATGTTGTCACCTGCAATCCGCCGTATTTTAAAACGCCGAAACAAACTG 397
||||||||||||||||||||||||.|||||||||||.||||||.|..|.|
RBAM_000430__ 348 TGATGTTGTCACCTGCAATCCGCCTTATTTTAAAACACCGAAAGAGGCGG 397
BSNT_00068___ 398 AACAAAACATGAACGAGCATCTCCGAATCGCAAGACATGAAATCCACTGC 447
|.||.|||.||||||||||||||.||||||||||.||.|||||||..|||
RBAM_000430__ 398 AGCAGAACCTGAACGAGCATCTCAGAATCGCAAGGCACGAAATCCTTTGC 447
BSNT_00068___ 448 ACGCTGGAGGATGTCATTTCAGTCAGCAGCAAGCTGCTCAAGCAAGGGGG 497
|||||.||.|||||.|||||.|||||||||||.|||||.||||||||.||
RBAM_000430__ 448 ACGCTTGAAGATGTGATTTCCGTCAGCAGCAAACTGCTGAAGCAAGGCGG 497
BSNT_00068___ 498 AAAAGCAGCTCTTGTTCACCGGCCGGGAAGGCTTCTGGAGATTTTTGAAC 547
||||||.|||||.|||||.||||||||.||||||.||||.||.||||||.
RBAM_000430__ 498 AAAAGCGGCTCTCGTTCATCGGCCGGGGAGGCTTTTGGAAATCTTTGAAT 547
BSNT_00068___ 548 TGATGAAGGCTTATCAAATCGAGCCAAAACGTGTACAATTTGTCTATCCG 597
|.|||||.||.||.|.|||.||.||.|||||.||.||.|||.|.||||||
RBAM_000430__ 548 TAATGAAAGCGTACCGAATAGAACCGAAACGGGTTCAGTTTATTTATCCG 597
BSNT_00068___ 598 AAGCAAGGGAAAGAAGCCAATACCATTTTGGTTGAAGGTATCAAAGGCGG 647
||.|||||.||||||||.||||||||||||||||||||.||.||||||||
RBAM_000430__ 598 AAACAAGGTAAAGAAGCGAATACCATTTTGGTTGAAGGAATTAAAGGCGG 647
BSNT_00068___ 648 GCGTCCGGATTTAAAAATTCTTCCTCCTTTATTCGTTTATGATGAACAAA 697
.||.||.|||.|.|||||||||||.||..|.|||||.||..|||||||||
RBAM_000430__ 648 CCGCCCTGATCTCAAAATTCTTCCCCCGCTGTTCGTATACAATGAACAAA 697
BSNT_00068___ 698 ATGAATATACAAAAGAAATCAGGACCATTTTATATGGAGACAAATAA 744
||||||||||.|||||.|||.|.||.||||||||||||||||||||.
RBAM_000430__ 698 ATGAATATACGAAAGAGATCCGCACGATTTTATATGGAGACAAATAG 744
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