Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00063 and RBAM_000400

See DNA alignment / Visit BSNT_00063 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:49
# Commandline: needle
#    -asequence pep-align/BSNT_00063___holB.1.9828.seq
#    -bsequence pep-align/RBAM_000400___holB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00063___holB-RBAM_000400___holB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00063___holB-RBAM_000400___holB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00063___holB
# 2: RBAM_000400___holB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 329
# Identity:     302/329 (91.8%)
# Similarity:   316/329 (96.0%)
# Gaps:           0/329 ( 0.0%)
# Score: 1559.0
# 
#
#=======================================

BSNT_00063___      1 MAISWKEMNELQPRVMKLLYNSIEKDRLSHAYLFEGKKGTGKLDAALLLA     50
                     ||||||||...|||||:||:|||||.||||||||||||||||||||||||
RBAM_000400__      1 MAISWKEMTGQQPRVMRLLHNSIEKKRLSHAYLFEGKKGTGKLDAALLLA     50

BSNT_00063___     51 KSFFCLEDGAEPCESCRNCKRIESGNHPDLHLVQPDGLSIKKAQIQALQE    100
                     |||||||||.|||..||||||||||||||||:||||||||||||||:|||
RBAM_000400__     51 KSFFCLEDGTEPCGECRNCKRIESGNHPDLHVVQPDGLSIKKAQIQSLQE    100

BSNT_00063___    101 EFSKTGLESHKKLYIISHADQMTANAANSLLKFLEEPNKDTMAVLITEQP    150
                     |||||||||||||||||||||||.|||||||||||||::||:|:|||||.
RBAM_000400__    101 EFSKTGLESHKKLYIISHADQMTTNAANSLLKFLEEPSQDTIAILITEQL    150

BSNT_00063___    151 QRLLDTIISRCQTLPFQPLQPKAIEDRLIEQDVSPHMARLLANMTNNVAE    200
                     .|:||||:||||.||||||||||||:|||||:|||||||||||||||:||
RBAM_000400__    151 HRILDTIVSRCQVLPFQPLQPKAIEERLIEQEVSPHMARLLANMTNNIAE    200

BSNT_00063___    201 AVELSRNDEFAESRAKVIKLYEVLHQRKGHAFFFIQDQWMPFFKEKTHQE    250
                     |||||||||||||||||||||||||||||||||||||||:||||||||||
RBAM_000400__    201 AVELSRNDEFAESRAKVIKLYEVLHQRKGHAFFFIQDQWVPFFKEKTHQE    250

BSNT_00063___    251 MGLDMLLLIYRDVLSIQIGNEDKLIYQDLFQSIKQHALQSTQQSVTNQIL    300
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
RBAM_000400__    251 MGLDMLLLIYRDVLSIQIGNEDKLIYQDLFQSIKQHALQFTQQSVTNQIL    300

BSNT_00063___    301 AVLEAKKRLHSNVNVQGLMEHLVLMLQEG    329
                     ||||||||||||||||||||||||.||||
RBAM_000400__    301 AVLEAKKRLHSNVNVQGLMEHLVLTLQEG    329


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