Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00062 and RBAM_000390

See DNA alignment / Visit BSNT_00062 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:49
# Commandline: needle
#    -asequence pep-align/BSNT_00062___yaaR.1.9828.seq
#    -bsequence pep-align/RBAM_000390___yaaR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00062___yaaR-RBAM_000390___yaaR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00062___yaaR-RBAM_000390___yaaR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00062___yaaR
# 2: RBAM_000390___yaaR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:     117/146 (80.1%)
# Similarity:   135/146 (92.5%)
# Gaps:           0/146 ( 0.0%)
# Score: 606.0
# 
#
#=======================================

BSNT_00062___      1 MKINKDIRTFIDNKQIPSVKTSEITASFKTSMENQSSKMKLDQLTRLLSD     50
                     ||||.|:||||:.||.|:.|.:|::.:||:||::||||:|.|||:|.|:|
RBAM_000390__      1 MKINSDLRTFIEKKQQPAYKAAELSGTFKSSMDSQSSKLKFDQLSRFLTD     50

BSNT_00062___     51 IEAFGKRLTKSRNFKDLARFKGLVKRFVKEAVDSGLSHETSKSFDLYGNS    100
                     ||.|||||||||||||||:|||||||||||||||||||||.|||||||:|
RBAM_000390__     51 IETFGKRLTKSRNFKDLAKFKGLVKRFVKEAVDSGLSHETEKSFDLYGSS    100

BSNT_00062___    101 RTLGLVKEIDDKLIQLTEEMMDQEKPAIDLLERIGEIKGLLINLYT    146
                     ||||||||||.||:||||||:||||||||||:||||||||||||||
RBAM_000390__    101 RTLGLVKEIDQKLLQLTEEMLDQEKPAIDLLDRIGEIKGLLINLYT    146


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