Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00061 and RBAM_000380

See DNA alignment / Visit BSNT_00061 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:49
# Commandline: needle
#    -asequence pep-align/BSNT_00061___yaaQ.1.9828.seq
#    -bsequence pep-align/RBAM_000380___yaaQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00061___yaaQ-RBAM_000380___yaaQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00061___yaaQ-RBAM_000380___yaaQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00061___yaaQ
# 2: RBAM_000380___yaaQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 109
# Identity:     106/109 (97.2%)
# Similarity:   107/109 (98.2%)
# Gaps:           0/109 ( 0.0%)
# Score: 536.0
# 
#
#=======================================

BSNT_00061___      1 MKLIVAVVQDQDSNRLLKTLTDHNFRVTKLATTGGFLKSGNTTFMIGVED     50
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
RBAM_000380__      1 MKLIVAVVQDQDSNRLLKVLTDHNFRVTKLATTGGFLKSGNTTFMIGVED     50

BSNT_00061___     51 IRVNKALSLIKENGQKRDQMIAPVSPMGGNADSYVPYPVEVEVGGATVFV    100
                     |||:||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_000380__     51 IRVDKALSLIKENGCKRDQMIAPVSPMGGNADSYVPYPVEVEVGGATVFV    100

BSNT_00061___    101 LPVDEFHQF    109
                     |||||||||
RBAM_000380__    101 LPVDEFHQF    109


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