Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00057 and RBAM_000340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:49
# Commandline: needle
# -asequence pep-align/BSNT_00057___xpaC.1.9828.seq
# -bsequence pep-align/RBAM_000340___xpaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00057___xpaC-RBAM_000340___xpaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00057___xpaC-RBAM_000340___xpaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00057___xpaC
# 2: RBAM_000340___xpaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 205
# Identity: 137/205 (66.8%)
# Similarity: 169/205 (82.4%)
# Gaps: 2/205 ( 1.0%)
# Score: 700.0
#
#
#=======================================
BSNT_00057___ 1 MQRFFHFLMWSLTSSATFVFIGILSFFGLNQSLFL-SIVYGLASGAAVYI 49
|:.|..::.|:|..|..||..|| :||.:....|| |::||.|||||...
RBAM_000340__ 1 MKPFIQYMKWTLCGSTVFVLAGI-TFFTIGHQPFLYSLLYGAASGAAASA 49
BSNT_00057___ 50 AGIWNARRLFLKKHELTGREYAYIKKNLEEARQKMVRLRKTLFQAKSIQM 99
||:|||:|||||||.||.:||||||:|||||:.|::|||:.||::|||||
RBAM_000340__ 50 AGLWNAKRLFLKKHRLTRKEYAYIKENLEEAKGKIIRLRRALFRSKSIQM 99
BSNT_00057___ 100 FKQNAEMLRIVRRIYLLTKKEPKRFYQAERFFYQTLDSVVELTEKYAFLS 149
.|||||:|||.||||||||:|||||||||||:|||||||||||||||.||
RBAM_000340__ 100 LKQNAEILRITRRIYLLTKQEPKRFYQAERFYYQTLDSVVELTEKYALLS 149
BSNT_00057___ 150 SHPKKSKELSMSLSETRITLTELTKRLEEDLTQAMDDEFDELQFELDAAK 199
|.|:|:|:|||||||||:||.||::||||||.:.|.::.|:|.||||.||
RBAM_000340__ 150 SQPRKNKDLSMSLSETRMTLAELSRRLEEDLHELMKEDIDDLHFELDMAK 199
BSNT_00057___ 200 HSLKK 204
|||:|
RBAM_000340__ 200 HSLRK 204
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