Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00056 and RBAM_000330

See DNA alignment / Visit BSNT_00056 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:49
# Commandline: needle
#    -asequence pep-align/BSNT_00056___csfB.1.9828.seq
#    -bsequence pep-align/RBAM_000330___csfB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00056___csfB-RBAM_000330___csfB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00056___csfB-RBAM_000330___csfB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00056___csfB
# 2: RBAM_000330___csfB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 64
# Identity:      41/64 (64.1%)
# Similarity:    55/64 (85.9%)
# Gaps:           0/64 ( 0.0%)
# Score: 249.0
# 
#
#=======================================

BSNT_00056___      1 MDETVKLNHTCVICDQEKNRGIHLYTKFICLDCERKVISTSTSDPDYAFY     50
                     |:||.....||::|:.:|:||||:|||||||:||:||:||.||||:|.|:
RBAM_000330__      1 MNETSSHEETCIVCETKKSRGIHIYTKFICLECEKKVVSTPTSDPNYEFF     50

BSNT_00056___     51 VKKLKSIHTPPLYS     64
                     |:||||:|||.|||
RBAM_000330__     51 VRKLKSLHTPTLYS     64


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