Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00056 and RBAM_000330

See Amino acid alignment / Visit BSNT_00056 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:49
# Commandline: needle
#    -asequence dna-align/BSNT_00056___csfB.1.9828.seq
#    -bsequence dna-align/RBAM_000330___csfB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00056___csfB-RBAM_000330___csfB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00056___csfB-RBAM_000330___csfB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00056___csfB
# 2: RBAM_000330___csfB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity:     142/203 (70.0%)
# Similarity:   142/203 (70.0%)
# Gaps:          16/203 ( 7.9%)
# Score: 474.5
# 
#
#=======================================

BSNT_00056___      1 ATGGACGAAACAGTTAAACTTAATCAT------ACATGTGTGATTTGTG-     43
                     |||.|.||||| ||..|.|     |||      ||||||.|..|.|||| 
RBAM_000330__      1 ATGAATGAAAC-GTCCAGC-----CATGAAGAAACATGTATTGTGTGTGA     44

BSNT_00056___     44 -ATCAAGAGAAGAATAGAGGCATTCATCTTTATACGAAATTCATATGCTT     92
                      |.|||.|.|||  .||.||.||.|||.|||||||||||||.|||||.||
RBAM_000330__     45 AACCAAAAAAAG--CAGGGGAATCCATATTTATACGAAATTTATATGTTT     92

BSNT_00056___     93 AGATTGTGAGAGAAAAGTAATTTCTACATCAACTTCTGATCCTGACTATG    142
                     |||.|||||||..||||||.||||.||..|.||.||||||||..|.||||
RBAM_000330__     93 AGAGTGTGAGAAGAAAGTAGTTTCCACTCCGACCTCTGATCCGAATTATG    142

BSNT_00056___    143 CGTTTTACGTAAAAAAACTAAAGAGCATTCATACACCGCCATTATATTCA    192
                     ..||||.|||....|||||.||.|||.|||||||||||.|.||||||||.
RBAM_000330__    143 AATTTTTCGTTCGTAAACTGAAAAGCCTTCATACACCGACGTTATATTCT    192

BSNT_00056___    193 TAG    195
                     ||.
RBAM_000330__    193 TAA    195


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