Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00056 and RBAM_000330
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:49
# Commandline: needle
# -asequence dna-align/BSNT_00056___csfB.1.9828.seq
# -bsequence dna-align/RBAM_000330___csfB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00056___csfB-RBAM_000330___csfB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00056___csfB-RBAM_000330___csfB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00056___csfB
# 2: RBAM_000330___csfB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 142/203 (70.0%)
# Similarity: 142/203 (70.0%)
# Gaps: 16/203 ( 7.9%)
# Score: 474.5
#
#
#=======================================
BSNT_00056___ 1 ATGGACGAAACAGTTAAACTTAATCAT------ACATGTGTGATTTGTG- 43
|||.|.||||| ||..|.| ||| ||||||.|..|.||||
RBAM_000330__ 1 ATGAATGAAAC-GTCCAGC-----CATGAAGAAACATGTATTGTGTGTGA 44
BSNT_00056___ 44 -ATCAAGAGAAGAATAGAGGCATTCATCTTTATACGAAATTCATATGCTT 92
|.|||.|.||| .||.||.||.|||.|||||||||||||.|||||.||
RBAM_000330__ 45 AACCAAAAAAAG--CAGGGGAATCCATATTTATACGAAATTTATATGTTT 92
BSNT_00056___ 93 AGATTGTGAGAGAAAAGTAATTTCTACATCAACTTCTGATCCTGACTATG 142
|||.|||||||..||||||.||||.||..|.||.||||||||..|.||||
RBAM_000330__ 93 AGAGTGTGAGAAGAAAGTAGTTTCCACTCCGACCTCTGATCCGAATTATG 142
BSNT_00056___ 143 CGTTTTACGTAAAAAAACTAAAGAGCATTCATACACCGCCATTATATTCA 192
..||||.|||....|||||.||.|||.|||||||||||.|.||||||||.
RBAM_000330__ 143 AATTTTTCGTTCGTAAACTGAAAAGCCTTCATACACCGACGTTATATTCT 192
BSNT_00056___ 193 TAG 195
||.
RBAM_000330__ 193 TAA 195
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