Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00043 and RBAM_000290

See DNA alignment / Visit BSNT_00043 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:49
# Commandline: needle
#    -asequence pep-align/BSNT_00043___bofA.1.9828.seq
#    -bsequence pep-align/RBAM_000290___bofA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00043___bofA-RBAM_000290___bofA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00043___bofA-RBAM_000290___bofA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00043___bofA
# 2: RBAM_000290___bofA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 87
# Identity:      66/87 (75.9%)
# Similarity:    81/87 (93.1%)
# Gaps:           0/87 ( 0.0%)
# Score: 355.0
# 
#
#=======================================

BSNT_00043___      1 MEPIFIIGIILGLVILLFLSGSAAKPLKWIGITAVKFVAGALLLVCVNMF     50
                     |||.||||:|:|||.||||.|.::|||:|||:||:||:|||:|||.||:|
RBAM_000290__      1 MEPFFIIGLIVGLVALLFLWGVSSKPLRWIGVTAIKFIAGAILLVGVNLF     50

BSNT_00043___     51 GGSLGIHVPINLVTTAISGILGIPGIAALVVIKQFII     87
                     |||||||:|:||:||.|||||||||||||:|||:|||
RBAM_000290__     51 GGSLGIHIPVNLITTGISGILGIPGIAALIVIKRFII     87


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