Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00042 and RBAM_000280

See DNA alignment / Visit BSNT_00042 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:48
# Commandline: needle
#    -asequence pep-align/BSNT_00042___yaaL.1.9828.seq
#    -bsequence pep-align/RBAM_000280___yaaL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00042___yaaL-RBAM_000280___yaaL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00042___yaaL-RBAM_000280___yaaL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00042___yaaL
# 2: RBAM_000280___yaaL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 74
# Identity:      65/74 (87.8%)
# Similarity:    71/74 (95.9%)
# Gaps:           0/74 ( 0.0%)
# Score: 343.0
# 
#
#=======================================

BSNT_00042___      1 MGFLRKKTLRREFDEKLTEQLFKQKEEWNRQKKLVEKSLEPSAEVLYELK     50
                     |||||:.|||:||||||.||||||||||||||.|||||||||||||:|||
RBAM_000280__      1 MGFLRRNTLRKEFDEKLIEQLFKQKEEWNRQKSLVEKSLEPSAEVLFELK     50

BSNT_00042___     51 VAEAKYFFYLREAKQRNLKISRWK     74
                     |||:||||||:||||||||:||||
RBAM_000280__     51 VAESKYFFYLKEAKQRNLKMSRWK     74


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