Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00042 and RBAM_000280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:49
# Commandline: needle
# -asequence dna-align/BSNT_00042___yaaL.1.9828.seq
# -bsequence dna-align/RBAM_000280___yaaL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00042___yaaL-RBAM_000280___yaaL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00042___yaaL-RBAM_000280___yaaL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00042___yaaL
# 2: RBAM_000280___yaaL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity: 182/226 (80.5%)
# Similarity: 182/226 (80.5%)
# Gaps: 2/226 ( 0.9%)
# Score: 722.0
#
#
#=======================================
BSNT_00042___ 1 ATGGGTTTTCTTCGCAAGAAA-ACATTAAGAAGAGAGTTTGATGAAAAAC 49
||||||||||||||| ||||| ||||||||||.|||||||||.||.||.|
RBAM_000280__ 1 ATGGGTTTTCTTCGC-AGAAATACATTAAGAAAAGAGTTTGACGAGAAGC 49
BSNT_00042___ 50 TAACCGAGCAGCTTTTTAAGCAAAAGGAAGAGTGGAACAGGCAAAAAAAG 99
|.|..||.|||||.|||||.|||||.|||||.||||||||.||.||.|..
RBAM_000280__ 50 TGATAGAACAGCTCTTTAAACAAAAAGAAGAATGGAACAGACAGAAGAGT 99
BSNT_00042___ 100 CTGGTCGAAAAAAGCTTAGAACCGTCTGCTGAAGTGTTATACGAACTGAA 149
||||||||.|||||..|.||.||.||.|||||.|||||.|..||.|||||
RBAM_000280__ 100 CTGGTCGAGAAAAGTCTCGAGCCCTCCGCTGAGGTGTTGTTTGAGCTGAA 149
BSNT_00042___ 150 AGTAGCTGAAGCGAAGTATTTTTTTTACTTAAGGGAAGCGAAGCAGCGAA 199
|||.||||||.|.|||||.||||||||.||.|..||||||||||||||.|
RBAM_000280__ 150 AGTCGCTGAATCTAAGTACTTTTTTTATTTGAAAGAAGCGAAGCAGCGGA 199
BSNT_00042___ 200 ATTTAAAAATCAGCCGGTGGAAGTAA 225
||||.|||||.|||.|.|||||||||
RBAM_000280__ 200 ATTTGAAAATGAGCAGATGGAAGTAA 225
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