Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00040 and RBAM_000260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:48
# Commandline: needle
# -asequence pep-align/BSNT_00040___yaaK.1.9828.seq
# -bsequence pep-align/RBAM_000260___yaaK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00040___yaaK-RBAM_000260___yaaK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00040___yaaK-RBAM_000260___yaaK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00040___yaaK
# 2: RBAM_000260___yaaK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 109
# Identity: 89/109 (81.7%)
# Similarity: 98/109 (89.9%)
# Gaps: 9/109 ( 8.3%)
# Score: 462.0
#
#
#=======================================
BSNT_00040___ 1 ---------MQKMMKQMQKMQKDMAKAQEELAEKVVEGTAGGGMVTVKAN 41
||||||||||||||||||||||||||:||||||||||||.|
RBAM_000260__ 1 MNMRGGMGNMQKMMKQMQKMQKDMAKAQEELAEKVLEGTAGGGMVTVKVN 50
BSNT_00040___ 42 GQKEILDVIIKEEVVDPEDIDMLQDLVLAATNEALKKVDEITNETMGQFT 91
||||::|:.|||||||||||:|||||||||||:||||||::|||||||||
RBAM_000260__ 51 GQKEVVDIAIKEEVVDPEDIEMLQDLVLAATNDALKKVDDMTNETMGQFT 100
BSNT_00040___ 92 KGMNMPGLF 100
||||:||||
RBAM_000260__ 101 KGMNIPGLF 109
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