Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00039 and RBAM_000250

See DNA alignment / Visit BSNT_00039 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:48
# Commandline: needle
#    -asequence pep-align/BSNT_00039___dnaX.1.9828.seq
#    -bsequence pep-align/RBAM_000250___dnaX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00039___dnaX-RBAM_000250___dnaX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00039___dnaX-RBAM_000250___dnaX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00039___dnaX
# 2: RBAM_000250___dnaX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 563
# Identity:     510/563 (90.6%)
# Similarity:   531/563 (94.3%)
# Gaps:           0/563 ( 0.0%)
# Score: 2602.0
# 
#
#=======================================

BSNT_00039___      1 MSYQALYRVFRPQRFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTG     50
                     |.|||||||||||:||||||||||||||||||||||||||||||||||||
RBAM_000250__      1 MGYQALYRVFRPQQFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTG     50

BSNT_00039___     51 KTSAAKIFAKAVNCEHAPVDEPCNECAACKGITNGSISDVIEIDAASNNG    100
                     |||||||||||||||||||:||||||||||||||||||||||||||||||
RBAM_000250__     51 KTSAAKIFAKAVNCEHAPVEEPCNECAACKGITNGSISDVIEIDAASNNG    100

BSNT_00039___    101 VDEIRDIRDKVKFAPSAVTYKVYIIDEVHMLSIGAFNALLKTLEEPPEHC    150
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_000250__    101 VDEIRDIRDKVKFAPSAVTYKVYIIDEVHMLSIGAFNALLKTLEEPPAHC    150

BSNT_00039___    151 IFILATTEPHKIPLTIISRCQRFDFKRITSQAIVGRMNKIVDAEQLQVEE    200
                     ||||||||||||||||||||||||||||||:||||||..|||||||:|||
RBAM_000250__    151 IFILATTEPHKIPLTIISRCQRFDFKRITSKAIVGRMKTIVDAEQLKVEE    200

BSNT_00039___    201 GSLDIIASAADGGMRDALSLLDQAISFSGDILKVEDALLITGAVSQLYIG    250
                     |:||||||||||||||||||||||:||||:.|.|:|||||||||||.|||
RBAM_000250__    201 GALDIIASAADGGMRDALSLLDQAVSFSGEELSVDDALLITGAVSQHYIG    250

BSNT_00039___    251 KLAQSLHDKNVSDALETLNELLQQGKDPAKLIEDMIFYFRDMLLYKTAPG    300
                     |||.:||.|.||:||||||||||||||.|||||||||||||||||:.|||
RBAM_000250__    251 KLASALHRKQVSEALETLNELLQQGKDAAKLIEDMIFYFRDMLLYQAAPG    300

BSNT_00039___    301 LEGVLEKVKVDETFRKLSEQIPAQALYEMIDILNKSHQEMKWTNHPRIFF    350
                     |||||||||||||||.||..|||.||||||||||||||||||||||||||
RBAM_000250__    301 LEGVLEKVKVDETFRNLSGDIPAPALYEMIDILNKSHQEMKWTNHPRIFF    350

BSNT_00039___    351 EVAVVKICQTSHQSAADLPEVDMLMKKIQQLEQEVERLKTTGIKAAAESP    400
                     ||||||||||:.|||.|:|||.|||.||||||||||||||:|:|...||.
RBAM_000250__    351 EVAVVKICQTAQQSAGDIPEVGMLMNKIQQLEQEVERLKTSGVKVQMESA    400

BSNT_00039___    401 KKEAPRVPKGGKSNYKAPVGRIHEILKEATRPDLDLLRNSWGKLLAHLKQ    450
                     .|||||..|||||:||||||||||||||||||:|:.|::|||||||||||
RBAM_000250__    401 PKEAPRPQKGGKSHYKAPVGRIHEILKEATRPELEQLKSSWGKLLAHLKQ    450

BSNT_00039___    451 QNKVSHAALLNDSEPVAAGSAAFVLKFKYEIHCKMVAEDNNGVRTNLEQI    500
                     ||||||||||||||||||...|||||||||||||||||||||||||||||
RBAM_000250__    451 QNKVSHAALLNDSEPVAAAQKAFVLKFKYEIHCKMVAEDNNGVRTNLEQI    500

BSNT_00039___    501 LESMLGKRMDLIGVPEAQWGKIREEFLEDHQQENEGSNEPAEEDPLIAEA    550
                     |||||||||||||||||||||||||||.|||||:||||||||||||||||
RBAM_000250__    501 LESMLGKRMDLIGVPEAQWGKIREEFLNDHQQESEGSNEPAEEDPLIAEA    550

BSNT_00039___    551 KKLVGADLIEIKD    563
                     |||||||||||||
RBAM_000250__    551 KKLVGADLIEIKD    563


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