Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00024 and RBAM_000140

See DNA alignment / Visit BSNT_00024 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:47
# Commandline: needle
#    -asequence pep-align/BSNT_00024___yaaD.1.9828.seq
#    -bsequence pep-align/RBAM_000140___pdxS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00024___yaaD-RBAM_000140___pdxS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00024___yaaD-RBAM_000140___pdxS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00024___yaaD
# 2: RBAM_000140___pdxS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     288/294 (98.0%)
# Similarity:   294/294 (100.0%)
# Gaps:           0/294 ( 0.0%)
# Score: 1454.0
# 
#
#=======================================

BSNT_00024___      1 MAQTGTERVKRGMAEMQKGGVIMDVINAEQAKIAEEAGAVAVMALERVPA     50
                     ||||||:||||||||||||||||||:||||||||||||||||||||||||
RBAM_000140__      1 MAQTGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPA     50

BSNT_00024___     51 DIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHVVEARVLEAMGVDY    100
                     ||||||||||||||||||||||||||||||||||||:|||||||||||||
RBAM_000140__     51 DIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDY    100

BSNT_00024___    101 IDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000140__    101 IDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKG    150

BSNT_00024___    151 EPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIK    200
                     ||||||||||||||||||||||||||||:|||||||||||||||||||||
RBAM_000140__    151 EPGTGNIVEAVRHMRKVNAQVRKVVAMSDDELMTEAKNLGAPYELLLQIK    200

BSNT_00024___    201 KDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKA    250
                     :|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000140__    201 RDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKA    250

BSNT_00024___    251 IVEATTHFTDYKLIAELSKELGTAMKGIEISNLLPEQRMQERGW    294
                     |||||||:||||||||||||||||||||||||||||||||||||
RBAM_000140__    251 IVEATTHYTDYKLIAELSKELGTAMKGIEISNLLPEQRMQERGW    294


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