Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00024 and RBAM_000140
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:47
# Commandline: needle
# -asequence dna-align/BSNT_00024___yaaD.1.9828.seq
# -bsequence dna-align/RBAM_000140___pdxS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00024___yaaD-RBAM_000140___pdxS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00024___yaaD-RBAM_000140___pdxS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00024___yaaD
# 2: RBAM_000140___pdxS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 885
# Identity: 753/885 (85.1%)
# Similarity: 753/885 (85.1%)
# Gaps: 0/885 ( 0.0%)
# Score: 3237.0
#
#
#=======================================
BSNT_00024___ 1 ATGGCTCAAACAGGTACTGAACGTGTAAAACGCGGAATGGCAGAAATGCA 50
||||||||||||||||||||.||||||||||||||.|||||.||||||||
RBAM_000140__ 1 ATGGCTCAAACAGGTACTGATCGTGTAAAACGCGGCATGGCGGAAATGCA 50
BSNT_00024___ 51 AAAAGGCGGCGTCATCATGGACGTCATCAATGCGGAACAAGCGAAAATCG 100
||||||||||||||||||||||||..|.|||||.|||||||||||.||.|
RBAM_000140__ 51 AAAAGGCGGCGTCATCATGGACGTTGTAAATGCTGAACAAGCGAAGATTG 100
BSNT_00024___ 101 CTGAAGAAGCTGGAGCTGTCGCTGTAATGGCGCTAGAACGTGTGCCGGCA 150
|.|||||.||.||||||||.||.|||||||||.|||||||.||.|||||.
RBAM_000140__ 101 CGGAAGAGGCGGGAGCTGTTGCCGTAATGGCGTTAGAACGCGTTCCGGCT 150
BSNT_00024___ 151 GATATTCGCGCGGCTGGAGGAGTTGCCCGTATGGCTGACCCTACAATCGT 200
|||||||||||.||.||.||.||||||||.||||||||.||.||||||||
RBAM_000140__ 151 GATATTCGCGCTGCCGGCGGTGTTGCCCGCATGGCTGATCCGACAATCGT 200
BSNT_00024___ 201 GGAAGAAGTAATGAATGCAGTATCTATCCCTGTAATGGCAAAAGCGCGTA 250
.|||||||||||||||||.|||||.||.||.|||||||||||||||||||
RBAM_000140__ 201 TGAAGAAGTAATGAATGCTGTATCCATTCCCGTAATGGCAAAAGCGCGTA 250
BSNT_00024___ 251 TCGGACATGTTGTTGAAGCGCGTGTGCTTGAAGCTATGGGTGTTGACTAT 300
||||||||.|.||||||||||||||.||||||||.|||||.||.||.||.
RBAM_000140__ 251 TCGGACATATCGTTGAAGCGCGTGTCCTTGAAGCAATGGGAGTAGATTAC 300
BSNT_00024___ 301 ATTGATGAAAGTGAAGTTCTGACGCCGGCTGATGAAGAATTTCATTTAAA 350
||.||||||||||||||||||||.||||||||.|||||||||||||||||
RBAM_000140__ 301 ATCGATGAAAGTGAAGTTCTGACTCCGGCTGACGAAGAATTTCATTTAAA 350
BSNT_00024___ 351 TAAAAATGAATACACAGTTCCTTTTGTTTGTGGCTGCCGTGATCTTGGTG 400
||||||.|||||.|||||.||.||.||.||.||||||||||||||.||.|
RBAM_000140__ 351 TAAAAACGAATATACAGTCCCGTTCGTATGCGGCTGCCGTGATCTCGGCG 400
BSNT_00024___ 401 AAGCAACACGCCGTATTGCGGAAGGTGCTTCTATGCTTCGCACAAAAGGT 450
|||||||.||||||||.||.|||||.|||||.||||||||.||||||||.
RBAM_000140__ 401 AAGCAACGCGCCGTATCGCCGAAGGAGCTTCCATGCTTCGTACAAAAGGC 450
BSNT_00024___ 451 GAGCCTGGAACAGGTAATATTGTTGAGGCTGTTCGCCATATGCGTAAAGT 500
||.||.||||||||.||.|||||.||.|||||.|||||||||.|.|||||
RBAM_000140__ 451 GAACCGGGAACAGGAAACATTGTGGAAGCTGTCCGCCATATGAGAAAAGT 500
BSNT_00024___ 501 TAACGCTCAAGTGCGCAAAGTAGTTGCGATGAGTGAGGATGAGCTAATGA 550
.|||||.||||||||||||||.|||||||||||.||.||.|||||.||||
RBAM_000140__ 501 AAACGCGCAAGTGCGCAAAGTTGTTGCGATGAGCGATGACGAGCTGATGA 550
BSNT_00024___ 551 CAGAAGCGAAAAACCTAGGTGCTCCTTACGAGCTTCTTCTTCAAATTAAA 600
|.|||||.||||||||.||.||||||||.||.||.|||||||||||.||.
RBAM_000140__ 551 CTGAAGCTAAAAACCTCGGCGCTCCTTATGAACTGCTTCTTCAAATCAAG 600
BSNT_00024___ 601 AAAGACGGCAAGCTTCCTGTCGTTAACTTTGCCGCTGGCGGCGTAGCAAC 650
...||||||||.||.|||||.||.||||||||.||.|||||.|||||.||
RBAM_000140__ 601 CGTGACGGCAAACTGCCTGTAGTGAACTTTGCTGCCGGCGGAGTAGCGAC 650
BSNT_00024___ 651 TCCAGCTGATGCTGCTCTCATGATGCAGCTTGGTGCTGACGGAGTATTTG 700
.||.|||||.||.||..|.||||||||||||||.||||||||.|||||||
RBAM_000140__ 651 GCCTGCTGACGCGGCATTGATGATGCAGCTTGGCGCTGACGGCGTATTTG 700
BSNT_00024___ 701 TTGGTTCTGGTATTTTTAAATCAGACAACCCTGCTAAATTTGCGAAAGCA 750
|.|||||.||||||||.|||||||||||||||||||||||.||.||||||
RBAM_000140__ 701 TCGGTTCAGGTATTTTCAAATCAGACAACCCTGCTAAATTCGCCAAAGCA 750
BSNT_00024___ 751 ATTGTGGAAGCAACAACTCACTTTACTGATTACAAATTAATCGCTGAGTT 800
|||||.||||||||.|||||.|..||.||.||||||.|.|||||||||.|
RBAM_000140__ 751 ATTGTTGAAGCAACGACTCATTACACAGACTACAAACTGATCGCTGAGCT 800
BSNT_00024___ 801 GTCAAAAGAGCTTGGTACTGCAATGAAAGGGATTGAAATCTCAAACTTAC 850
.||.|||||..|.||.||.||.||||||||.||.|||||||||||..||.
RBAM_000140__ 801 TTCTAAAGAATTAGGCACAGCGATGAAAGGAATCGAAATCTCAAATCTAT 850
BSNT_00024___ 851 TTCCAGAACAGCGTATGCAAGAACGCGGCTGGTAA 885
|.||.||||||||||||||||||||||||||||||
RBAM_000140__ 851 TGCCGGAACAGCGTATGCAAGAACGCGGCTGGTAA 885
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