Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00021 and RBAM_000110

See DNA alignment / Visit BSNT_00021 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:47
# Commandline: needle
#    -asequence pep-align/BSNT_00021___yaaC.1.9828.seq
#    -bsequence pep-align/RBAM_000110___yaaC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00021___yaaC-RBAM_000110___yaaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00021___yaaC-RBAM_000110___yaaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00021___yaaC
# 2: RBAM_000110___yaaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 316
# Identity:     220/316 (69.6%)
# Similarity:   267/316 (84.5%)
# Gaps:           1/316 ( 0.3%)
# Score: 1225.0
# 
#
#=======================================

BSNT_00021___      1 MTYHEWKDLALFYSVESTQKFLEKVYILNGIDDAKKNSFKNSERFIYFLK     50
                     |..||||:|:|||||||:||||.|||..:|:::.|:.:||||||||:|:|
RBAM_000110__      1 MRDHEWKELSLFYSVESSQKFLNKVYTESGMEEPKRYAFKNSERFIFFIK     50

BSNT_00021___     51 HAESFYKQAAYSPLEIKPILLFYGMAQLIKACLITRDPHYPSHTSVLAHG    100
                     |||||||||:.||||||||||||||:||:||||:|.||.||||.||||||
RBAM_000110__     51 HAESFYKQASLSPLEIKPILLFYGMSQLLKACLLTTDPSYPSHASVLAHG    100

BSNT_00021___    101 VTTRKRKKQNYCFSDDEVKIQRNGLCVHFMKHLFGQSDIVDERYTMKKLL    150
                     ||.||||||||.|.|||||:||||||:|.||||||.:.:.:||||||||:
RBAM_000110__    101 VTARKRKKQNYSFRDDEVKVQRNGLCIHVMKHLFGIAGLEEERYTMKKLM    150

BSNT_00021___    151 MAIPELSDIFYFQQKERFMTKVEKDKNEIFVPEEVVINYKMSDSRFAEYM    200
                     .|||||..:||||:|:.::|:||...:.|.|||..||:|.|||||||||:
RBAM_000110__    151 TAIPELHTVFYFQEKKNWLTRVELKDDLISVPEHAVIHYNMSDSRFAEYI    200

BSNT_00021___    201 SHHYQWSFTKKNEHGLLFEISPQDKEPWTSTSLLFDMEKNQYYIPSQREQ    250
                     |||.:|||.:|:.:.|:||..|.|||||:|.:|||.:|||||||||||:.
RBAM_000110__    201 SHHLKWSFLRKDHNHLVFEADPIDKEPWSSPNLLFHLEKNQYYIPSQRDH    250

BSNT_00021___    251 FLRLPEMTIHYLILYNVGMIARYETEWWYELLTQHISDDYVLIQQFLLVT    300
                     ||.||||.||||:|||:||||||||||||||||||:|||||:|::||.||
RBAM_000110__    251 FLHLPEMIIHYLVLYNIGMIARYETEWWYELLTQHVSDDYVMIRRFLEVT    300

BSNT_00021___    301 EKKFPKYASQFLLHF-    315
                     |:|||.|.|.||..: 
RBAM_000110__    301 ERKFPYYVSNFLKQYL    316


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