Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00021 and RBAM_000110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:47
# Commandline: needle
# -asequence dna-align/BSNT_00021___yaaC.1.9828.seq
# -bsequence dna-align/RBAM_000110___yaaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00021___yaaC-RBAM_000110___yaaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00021___yaaC-RBAM_000110___yaaC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00021___yaaC
# 2: RBAM_000110___yaaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 984
# Identity: 674/984 (68.5%)
# Similarity: 674/984 (68.5%)
# Gaps: 69/984 ( 7.0%)
# Score: 2143.5
#
#
#=======================================
BSNT_00021___ 1 ATGACATATCATGAGTGGAAAGACTTAGCGCTATTTTACTCCGTTGAATC 50
||||.|.||||||||||||||||.|||.|..|||||||.|||||.|||||
RBAM_000110__ 1 ATGAGAGATCATGAGTGGAAAGAGTTATCATTATTTTATTCCGTAGAATC 50
BSNT_00021___ 51 AACCCAGAAATTTCTAGAAAAGGTTTATATCTTAAA-CGGTATTGACGAT 99
..||||||||||||||.|.||.||.|||| |..||| |||.||.||.||.
RBAM_000110__ 51 TTCCCAGAAATTTCTAAATAAAGTCTATA-CAGAAAGCGGCATGGAAGAA 99
BSNT_00021___ 100 GCGAAAAAAAACTCTTTTAAAAACAGTGAACGGTTTAT-TTATTTCTTAA 148
.|.|||..|.|..|.|||||.||||||||.||.||.|| ||.|||.|.||
RBAM_000110__ 100 CCAAAACGATATGCGTTTAAGAACAGTGAGCGCTTCATATTCTTTATCAA 149
BSNT_00021___ 149 AGCATGCCGAATCGTTTTATAAACAAGCCGCATATTCTCCCTTAGAAATC 198
| ||.|||||.||.||.|||||.||.||..|...|||.||.||||||||.
RBAM_000110__ 150 A-CACGCCGAGTCCTTCTATAAGCAGGCATCTCTTTCCCCTTTAGAAATT 198
BSNT_00021___ 199 AAACCGATTCTTTTATTTTATGGAATGGCACAGCTTATCAAAGCATG-CT 247
||.||.|||||.||.|||||.||.|||.||||..|..|.|||||.|| ||
RBAM_000110__ 199 AAGCCTATTCTGTTGTTTTACGGGATGTCACAATTGCTGAAAGCCTGTCT 248
BSNT_00021___ 248 --TAATTACACGTGATCCTCATTATCCAAGCCATACATCAGTACTGGCAC 295
|.|..||| |||||....|||||||||||..|.||||||||.||.|
RBAM_000110__ 249 TCTGACCACA---GATCCAAGCTATCCAAGCCACGCCTCAGTACTCGCGC 295
BSNT_00021___ 296 ATGGCGTAACAACAAGAAAACGAAAGAAACAAAATTATTGTTTTAGCGAT 345
|||||||.||..|..|.|||||.||.||.||||||||.|..|||||.|||
RBAM_000110__ 296 ATGGCGTGACTGCCCGGAAACGCAAAAAGCAAAATTACTCCTTTAGGGAT 345
BSNT_00021___ 346 GATGAAGTGAAAATACAACGAAATGGACTATGCGTGCATTTTATGAAACA 395
|||||||||||..|.||.||.|||||..||||..|.|||.|.|||||.||
RBAM_000110__ 346 GATGAAGTGAAGGTGCAGCGCAATGGTTTATGTATTCATGTAATGAAGCA 395
BSNT_00021___ 396 TTTATTCGGACAATCGGATA-------TAGTAGATGAACGGTATACCATG 438
.||||||| ||||| |.|..||.||||||||.||.|||
RBAM_000110__ 396 CTTATTCG-------GGATAGCTGGTCTTGAGGAAGAACGGTACACAATG 438
BSNT_00021___ 439 AAAAAATTATTAATGGCCATTCCAGAACTTAGCGATA---TTTTCTACTT 485
||.|||||..|.|..|||||.||.||| |.|| ||| |.||.|||||
RBAM_000110__ 439 AAGAAATTGATGACAGCCATACCTGAA--TTGC-ATACTGTCTTTTACTT 485
BSNT_00021___ 486 TCAGCAGAAAGAACGATTT--ATGACAAAAGTTGA---GAAGGATAAGAA 530
.|| |||.|.||.||.|| .||||...|||.|| |||.||| .|
RBAM_000110__ 486 CCA--AGAGAAAAAGAATTGGCTGACCCGAGTAGAGCTGAAAGAT---GA 530
BSNT_00021___ 531 CGAAATTTTTGTACCGGAGGAAGTAGTAATCAATTACAAAATGTCTGATT 580
|...||||..||.||.|||.|.|..||.||..|||||||.||||||||||
RBAM_000110__ 531 CCTTATTTCAGTGCCTGAGCATGCGGTGATTCATTACAATATGTCTGATT 580
BSNT_00021___ 581 CAAGGTTTGCTGAATACATGTCCCATCATTATCAA-TGGTCTTTT---AC 626
|..|.|||||||||||.||...|||||||| |.|| ||||||||| |.
RBAM_000110__ 581 CCCGCTTTGCTGAATATATCAGCCATCATT-TGAAGTGGTCTTTTCTGAG 629
BSNT_00021___ 627 AAAAAAAAATGAACACGGGCT-------GCTGTTCGAAATTTCACCACA- 668
.|||.|..||.|.|||..|.| |||| |||..|
RBAM_000110__ 630 GAAAGACCATAATCACTTGGTTTTTGAGGCTG-----------ACCCGAT 668
BSNT_00021___ 669 AGACAAGGAGCCATGGACATCGACCAGCTTATTGTTTGACATGGAAAAGA 718
||||||.||.||.|||.|.|||.|.|..|||||||||.||.||||.||.|
RBAM_000110__ 669 AGACAAAGAACCTTGGTCTTCGCCAAATTTATTGTTTCACTTGGAGAAAA 718
BSNT_00021___ 719 ACCAATATTATATCCCTTCTCAAAGGGAGCAATTTCTGAGGCTTCCCGAA 768
|.||||||||.||.||.|||||..|.||.||.||.|||...|||||.|||
RBAM_000110__ 719 ATCAATATTACATTCCCTCTCAGCGTGATCACTTCCTGCATCTTCCGGAA 768
BSNT_00021___ 769 ATGACAATTCATTATTTGATTTTGTACAACGTTGGGATGATTGCAAGGTA 818
||||..||||||||||||.||.|.|||||..|.|||||||||||.||.||
RBAM_000110__ 769 ATGATTATTCATTATTTGGTTCTCTACAATATCGGGATGATTGCGAGATA 818
BSNT_00021___ 819 TGAAACAGAATGGTGGTATGAGTTATTAACACAGCATATAAGTGATGACT 868
||||||.||.|||||||||||..|..|.|||||||||.|.||||||||.|
RBAM_000110__ 819 TGAAACGGAGTGGTGGTATGAACTGCTGACACAGCATGTCAGTGATGATT 868
BSNT_00021___ 869 ACGTGTTAATTCAGCAGTTTTTATTAGTAACAGAAAAGAAATTCCCTAAA 918
|.|||.|.||.|..|.|||.|||...||.||.|||...|||||.||..|.
RBAM_000110__ 869 ATGTGATGATCCGCCGGTTCTTAGAGGTCACGGAACGCAAATTTCCGTAT 918
BSNT_00021___ 919 TACGCTTCACAGTTTCTT----CTTCATTTTTAA 948
||||.||| .|.||||.| |...|.||.|||
RBAM_000110__ 919 TACGTTTC-TAATTTCCTGAAGCAATACTTATAA 951
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